RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 CEP170P1Q96L14 293 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
CDH3-206ENST00000567674 LXNQ9BS40 222 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
CDH3-206ENST00000567674 TTC12Q9H892 705 aaPredicted RBP12.51□□□□□ -0.41
CDH3-206ENST00000567674 TUFT1Q9NNX1 390 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 UBN1Q9NPG3 1134 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
CDH3-206ENST00000567674 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 GINS2Q9Y248 185 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 PRRC2BQ5JSZ5 2229 aaKnown RBP12.51□□□□□ -0.41
CDH3-206ENST00000567674 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 WDR81Q562E7 1941 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 POLGP54098 1239 aaPredicted RBP12.5□□□□□ -0.41
CDH3-206ENST00000567674 NCBP1Q09161 790 aaKnown RBP12.5□□□□□ -0.41
CDH3-206ENST00000567674 CTC1Q2NKJ3 1217 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 MTERF2Q49AM1 385 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 NOSTRINQ8IVI9 506 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 LRRC71Q8N4P6 559 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 ERMNQ8TAM6 284 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 PGBD4Q96DM1 585 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 CCDC51Q96ER9 411 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 POLR3CQ9BUI4 534 aaPredicted RBP12.5□□□□□ -0.41
CDH3-206ENST00000567674 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 PUF60Q9UHX1 559 aaKnown RBP12.5□□□□□ -0.41
CDH3-206ENST00000567674 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
CDH3-206ENST00000567674 COL4A3BPQ9Y5P4 624 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 EVPLQ92817 2033 aa12.5□□□□□ -0.41
CDH3-206ENST00000567674 MGEA5O60502 916 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 JAK2O60674 1132 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 TFDP1Q14186 410 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 BMS1Q14692 1282 aaKnown RBP12.49□□□□□ -0.41
CDH3-206ENST00000567674 TMEM266Q2M3C6 531 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 EARS2Q5JPH6 523 aaKnown RBP12.49□□□□□ -0.41
CDH3-206ENST00000567674 ZNF598Q86UK7 904 aaKnown RBP12.49□□□□□ -0.41
CDH3-206ENST00000567674 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 ABI1Q8IZP0 508 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 LRRC43Q8N309 656 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 SPPL3Q8TCT6 385 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 SCLT1Q96NL6 688 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 NACC1Q96RE7 527 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 EIF2AK1Q9BQI3 630 aaKnown RBP12.49□□□□□ -0.41
CDH3-206ENST00000567674 UBE2ZQ9H832 354 aaPredicted RBP12.49□□□□□ -0.41
CDH3-206ENST00000567674 IFT122Q9HBG6 1241 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 GJB4Q9NTQ9 266 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 KANSL3Q9P2N6 904 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 DBR1Q9UK59 544 aaKnown RBP12.49□□□□□ -0.41
CDH3-206ENST00000567674 MTUS1Q9ULD2 1270 aa12.49□□□□□ -0.41
CDH3-206ENST00000567674 MRPL42Q9Y6G3 142 aaKnown RBP12.49□□□□□ -0.41
CDH3-206ENST00000567674 ZMYM2Q9UBW7 1377 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 RPA1P27694 616 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDH3-206ENST00000567674 FOXK2Q01167 660 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 KRT17Q04695 432 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 ST3GAL1Q11201 340 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 HAUS3Q68CZ6 603 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 NCAPH2Q6IBW4 605 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 MRPL10Q7Z7H8 261 aaKnown RBP12.48□□□□□ -0.41
CDH3-206ENST00000567674 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 RHPN2Q8IUC4 686 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 CCDC83Q8IWF9 413 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 TPH2Q8IWU9 490 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 MCPH1Q8NEM0 835 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 GJA10Q969M2 543 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 CASD1Q96PB1 797 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 UIMC1Q96RL1 719 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 MTRQ99707 1265 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 NGRNQ9NPE2 291 aaKnown RBP12.48□□□□□ -0.41
CDH3-206ENST00000567674 PRKAG3Q9UGI9 489 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 KCNG1Q9UIX4 513 aa12.48□□□□□ -0.41
CDH3-206ENST00000567674 CNTNAP2Q9UHC6 1331 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 A0A087WZ62 844 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 PRPHP41219 470 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 TXKP42681 527 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 PHKA2P46019 1235 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 RARRES1P49788 294 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 GIT2Q14161 759 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 XKR9Q5GH70 373 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 TRMT1LQ7Z2T5 733 aaKnown RBP12.47□□□□□ -0.41
CDH3-206ENST00000567674 SPRED2Q7Z698 418 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 KLHL23Q8NBE8 558 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 PRPF31Q8WWY3 499 aaKnown RBP12.47□□□□□ -0.41
CDH3-206ENST00000567674 DYDC2Q96IM9 177 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 FDXACB1Q9BRP7 624 aaPredicted RBP12.47□□□□□ -0.41
CDH3-206ENST00000567674 AGPAT5Q9NUQ2 364 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 RGL1Q9NZL6 768 aa12.47□□□□□ -0.41
CDH3-206ENST00000567674 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
CDH3-206ENST00000567674 PHLPP2Q6ZVD8 1323 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 COL4A4P53420 1690 aaPredicted RBP12.46□□□□□ -0.41
CDH3-206ENST00000567674 TBKBP1A7MCY6 615 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 GRM6O15303 877 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 SLC26A4O43511 780 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 ITGB1P05556 798 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 OR52Z1P0C646 297 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 ALADP13716 330 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 ARL2P36404 184 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 NPEPPSP55786 919 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 PTENP60484 403 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 LAMTOR4Q0VGL1 99 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms