RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 PDILTQ8N807 584 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 PHOSPHO2Q8TCD6 241 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-219ENST00000567399 TMEM40Q8WWA1 233 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 KIFAP3Q92845 792 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 POLD4Q9HCU8 107 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 PCDHA7Q9UN72 937 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 EVPLQ92817 2033 aa16.8■□□□□ 0.28
COMMD4-219ENST00000567399 MYH15Q9Y2K3 1946 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 UPP2O95045 317 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 FGFR4P22455 802 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 GLRA2P23416 452 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 MCM6Q14566 821 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 TCTN1Q2MV58 587 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 FAM117BQ6P1L5 589 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.79■□□□□ 0.28
COMMD4-219ENST00000567399 SRGAP1Q7Z6B7 1085 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 GPBP1Q86WP2 473 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 ZBTB8OSQ8IWT0 167 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 DEPTORQ8TB45 409 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 ASAP3Q8TDY4 903 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
COMMD4-219ENST00000567399 RAD54LQ92698 747 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 CHAMP1Q96JM3 812 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 DRC1Q96MC2 740 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 TIPINQ9BVW5 301 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 ERVK-5Q9HDB9 667 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 STK17AQ9UEE5 414 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 MSRAQ9UJ68 235 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 LRFN2Q9ULH4 789 aa16.79■□□□□ 0.28
COMMD4-219ENST00000567399 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 CCDC169A6NNP5 214 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 GRXCR1A8MXD5 290 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 RBAK-RBAKDNI3L0D1 243 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 INO80B-WBP1J3KQ70 363 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 ENPP3O14638 875 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 HIP1RO75146 1068 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 ERLIN2O94905 339 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 LIG1P18858 919 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 DEFB103AP81534 67 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 TMEM132AQ24JP5 1023 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 RASIP1Q5U651 963 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 FAM43BQ6ZT52 329 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-219ENST00000567399 C1orf186Q6ZWK4 172 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 ADAM2Q99965 735 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-219ENST00000567399 KCND2Q9NZV8 630 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
COMMD4-219ENST00000567399 ARID2Q68CP9 1835 aa16.77■□□□□ 0.28
COMMD4-219ENST00000567399 SMAD3P84022 425 aaKnown RBP16.77■□□□□ 0.28
COMMD4-219ENST00000567399 CAPSQ13938 189 aa16.77■□□□□ 0.28
COMMD4-219ENST00000567399 HERC6Q8IVU3 1022 aa16.77■□□□□ 0.28
COMMD4-219ENST00000567399 C2orf40Q9H1Z8 148 aa16.77■□□□□ 0.28
COMMD4-219ENST00000567399 IFT122Q9HBG6 1241 aa16.77■□□□□ 0.28
COMMD4-219ENST00000567399 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
COMMD4-219ENST00000567399 BLOC1S4Q9NUP1 217 aa16.77■□□□□ 0.28
COMMD4-219ENST00000567399 KCNG1Q9UIX4 513 aa16.77■□□□□ 0.28
COMMD4-219ENST00000567399 SFI1A8K8P3 1242 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 TLL1O43897 1013 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 FAM13AO94988 1023 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 STAG3L1P0CL83 205 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 GUCY2CP25092 1073 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 NAMPTP43490 491 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 RABGGTBP53611 331 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 PEX3P56589 373 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 PTENP60484 403 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 POU5F1BQ06416 359 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-219ENST00000567399 RAB30Q15771 203 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 AXDND1Q5T1B0 1012 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-219ENST00000567399 TWF2Q6IBS0 349 aaKnown RBP16.76■□□□□ 0.27
COMMD4-219ENST00000567399 SHC4Q6S5L8 630 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 DHX58Q96C10 678 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 TMX1Q9H3N1 280 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 GDPD2Q9HCC8 539 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 C1orf112Q9NSG2 853 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 DACT1Q9NYF0 836 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
COMMD4-219ENST00000567399 PCDHB7Q9Y5E2 793 aa16.76■□□□□ 0.27
COMMD4-219ENST00000567399 NPHP3-ACAD11A0A0J9YXS1 232 aa16.75■□□□□ 0.27
COMMD4-219ENST00000567399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 TBCAO75347 108 aaKnown RBP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 SMTNP53814 917 aa16.75■□□□□ 0.27
COMMD4-219ENST00000567399 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 PCBP1Q15365 356 aaKnown RBP eCLIP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 CSPP1Q1MSJ5 1256 aa16.75■□□□□ 0.27
COMMD4-219ENST00000567399 RESP18Q5W5W9 173 aa16.75■□□□□ 0.27
COMMD4-219ENST00000567399 ADALQ6DHV7 355 aa16.75■□□□□ 0.27
COMMD4-219ENST00000567399 FAM109BQ6ICB4 259 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 TMCO2Q7Z6W1 182 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 IPO9Q96P70 1041 aaKnown RBP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 PYM1Q9BRP8 204 aaKnown RBP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 LRRC27Q9C0I9 530 aa16.75■□□□□ 0.27
COMMD4-219ENST00000567399 TSPYL2Q9H2G4 693 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-219ENST00000567399 KMT5AQ9NQR1 393 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms