RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
RNF40-211ENST00000567365 PBX2P40425 430 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 PTENP60484 403 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 PAK2Q13177 524 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 CAPSQ13938 189 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 MXD4Q14582 209 aaPredicted RBP13.79□□□□□ -0.2
RNF40-211ENST00000567365 STK38Q15208 465 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
RNF40-211ENST00000567365 RINT1Q6NUQ1 792 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
RNF40-211ENST00000567365 HERC6Q8IVU3 1022 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 FAM161BQ96MY7 647 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 RUSC1Q9BVN2 902 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 FTHL17Q9BXU8 183 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 PBX4Q9BYU1 374 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 A0A0C4DFX4 3053 aa13.79□□□□□ -0.2
RNF40-211ENST00000567365 A0A087X0B3 334 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 ZBBXA8MT70 800 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 GPR182O15218 404 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 CSDE1O75534 798 aaKnown RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 GJB5O95377 273 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 PLCG1P19174 1290 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 FAM189BP81408 668 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 HTRA4P83105 476 aaPredicted RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 ARSHQ5FYA8 562 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 TMCO2Q7Z6W1 182 aaPredicted RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 KCNG4Q8TDN1 519 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 NLRP7Q8WX94 980 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 BSNDQ8WZ55 320 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 TOP1MTQ969P6 601 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 NLRP4Q96MN2 994 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 COL25A1Q9BXS0 654 aaPredicted RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 RC3H2Q9HBD1 1191 aaKnown RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 YBX2Q9Y2T7 364 aaKnown RBP13.78□□□□□ -0.2
RNF40-211ENST00000567365 EYSQ5T1H1 3165 aa13.78□□□□□ -0.2
RNF40-211ENST00000567365 C9IYK1 514 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 PLA2G4BP0C869 781 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 SRGAP2CP0DJJ0 459 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 FGFR4P22455 802 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 KCNJ6P48051 423 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 NUCB2P80303 420 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 NFX1Q12986 1120 aaKnown RBP13.77□□□□□ -0.21
RNF40-211ENST00000567365 AMHR2Q16671 573 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 ODR4Q5SWX8 454 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 CDCA2Q69YH5 1023 aaPredicted RBP13.77□□□□□ -0.21
RNF40-211ENST00000567365 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 LEO1Q8WVC0 666 aaPredicted RBP13.77□□□□□ -0.21
RNF40-211ENST00000567365 RAD54LQ92698 747 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 CALML4Q96GE6 196 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.21
RNF40-211ENST00000567365 PLIN2Q99541 437 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 TRAIPQ9BWF2 469 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 CFAP45Q9UL16 551 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 PCDHA7Q9UN72 937 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 PCDHA11Q9Y5I1 949 aa13.77□□□□□ -0.21
RNF40-211ENST00000567365 ADGRA3Q8IWK6 1321 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 CUTAO60888 179 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 ARHGEF15O94989 841 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 DNAJB2P25686 324 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 HOXA11P31270 313 aaPredicted RBP13.76□□□□□ -0.21
RNF40-211ENST00000567365 RABGGTBP53611 331 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 MBTD1Q05BQ5 628 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 ZRSR1Q15695 479 aaKnown RBP13.76□□□□□ -0.21
RNF40-211ENST00000567365 E2F4Q16254 413 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 MAEAQ7L5Y9 396 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
RNF40-211ENST00000567365 KIFAP3Q92845 792 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 KCNN1Q92952 543 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 CDK5RAP3Q96JB5 506 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 ADAM2Q99965 735 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 TIPINQ9BVW5 301 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 INO80BQ9C086 356 aaPredicted RBP13.76□□□□□ -0.21
RNF40-211ENST00000567365 POLD4Q9HCU8 107 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 AGPAT5Q9NUQ2 364 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
RNF40-211ENST00000567365 TMEM265A0A087WTH1 108 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 AMHP03971 560 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 MYOGP15173 224 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 SFPQP23246 707 aaKnown RBP eCLIP13.75□□□□□ -0.21
RNF40-211ENST00000567365 PHKA2P46019 1235 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 KRT85P78386 507 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 PCBP1Q15365 356 aaKnown RBP eCLIP13.75□□□□□ -0.21
RNF40-211ENST00000567365 RAB30Q15771 203 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 FAM102BQ5T8I3 360 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 RESP18Q5W5W9 173 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 MYOCDQ8IZQ8 938 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 LARP4BQ92615 738 aaKnown RBP13.75□□□□□ -0.21
RNF40-211ENST00000567365 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
RNF40-211ENST00000567365 NTPCRQ9BSD7 190 aaKnown RBP13.75□□□□□ -0.21
RNF40-211ENST00000567365 CCDC113Q9H0I3 377 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 TTYH1Q9H313 450 aaPredicted RBP13.75□□□□□ -0.21
RNF40-211ENST00000567365 FZD8Q9H461 694 aa13.75□□□□□ -0.21
RNF40-211ENST00000567365 CHST12Q9NRB3 414 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms