RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 PLXNA4Q9HCM2 1894 aa15.97■□□□□ 0.15
COMMD4-216ENST00000567023 C19orf67A6NJJ6 358 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 LINC01565O15544 149 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 MBTPS2O43462 519 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 CSDE1O75534 798 aaKnown RBP15.96■□□□□ 0.15
COMMD4-216ENST00000567023 EYA4O95677 639 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 ATF7P17544 494 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-216ENST00000567023 FGFR4P22455 802 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 ZP2Q05996 745 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 PLA2G4FQ68DD2 849 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 RHPN2Q8IUC4 686 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 ADHFE1Q8IWW8 467 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 ABI1Q8IZP0 508 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 SLC7A3Q8WY07 619 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 IGFLR1Q9H665 355 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 BRMS1Q9HCU9 246 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 TLR9Q9NR96 1032 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 HCSTQ9UBK5 93 aa15.96■□□□□ 0.15
COMMD4-216ENST00000567023 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 GPR37L1O60883 481 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 BAG4O95429 457 aaKnown RBP15.95■□□□□ 0.14
COMMD4-216ENST00000567023 SEC24BO95487 1268 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 SFPQP23246 707 aaKnown RBP eCLIP15.95■□□□□ 0.14
COMMD4-216ENST00000567023 NPEPPSP55786 919 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 ERVFC1P60507 584 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 SMAD4Q13485 552 aaKnown RBP15.95■□□□□ 0.14
COMMD4-216ENST00000567023 CLLU1OSQ5K130 101 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 OTUD6AQ7L8S5 288 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 THNSL1Q8IYQ7 743 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 LRRC43Q8N309 656 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
COMMD4-216ENST00000567023 MRPS27Q92552 414 aaKnown RBP15.95■□□□□ 0.14
COMMD4-216ENST00000567023 CEP170P1Q96L14 293 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 CDCA3Q99618 268 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-216ENST00000567023 LXNQ9BS40 222 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 ZSWIM4Q9H7M6 989 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 IFT122Q9HBG6 1241 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 CLEC1BQ9P126 229 aa15.95■□□□□ 0.14
COMMD4-216ENST00000567023 TRIOO75962 3097 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 FAM205CA6NFA0 338 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 BTBD18B2RXH4 712 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 FSCN2O14926 492 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 GAS2O43903 313 aaKnown RBP15.94■□□□□ 0.14
COMMD4-216ENST00000567023 MARCH6O60337 910 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 ZNF623O75123 536 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 SLITRK3O94933 977 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 CSPG5O95196 566 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 SKIP12755 728 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 YWHABP31946 246 aaKnown RBP15.94■□□□□ 0.14
COMMD4-216ENST00000567023 PPM1AP35813 382 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 RFC5P40937 340 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 PHKA2P46019 1235 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 NRIP1P48552 1158 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 COASYQ13057 564 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 KCNT2Q6UVM3 1135 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 KSR1Q8IVT5 923 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 MICAL1Q8TDZ2 1067 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 HSD17B14Q9BPX1 270 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 LRFN3Q9BTN0 628 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 TLE6Q9H808 572 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 C11orf16Q9NQ32 467 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 RGL1Q9NZL6 768 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
COMMD4-216ENST00000567023 CD207Q9UJ71 328 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 PCDHA12Q9UN75 941 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 COL4A3BPQ9Y5P4 624 aa15.94■□□□□ 0.14
COMMD4-216ENST00000567023 JAK2O60674 1132 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 GLP2RO95838 553 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 ALADP13716 330 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
COMMD4-216ENST00000567023 NDUFV1P49821 464 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 POLGP54098 1239 aaPredicted RBP15.93■□□□□ 0.14
COMMD4-216ENST00000567023 KCNC3Q14003 757 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 DUSP6Q16828 381 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 TMEM31Q5JXX7 168 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 TMEM184AQ6ZMB5 413 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 RBM23Q86U06 439 aaKnown RBP15.93■□□□□ 0.14
COMMD4-216ENST00000567023 SMRP1Q8NCR6 262 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 PRPF31Q8WWY3 499 aaKnown RBP15.93■□□□□ 0.14
COMMD4-216ENST00000567023 PSPC1Q8WXF1 523 aaKnown RBP15.93■□□□□ 0.14
COMMD4-216ENST00000567023 NLRP4Q96MN2 994 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 ZNF558Q96NG5 402 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 MTMR9Q96QG7 549 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 MRPL9Q9BYD2 267 aaKnown RBP15.93■□□□□ 0.14
COMMD4-216ENST00000567023 NGRNQ9NPE2 291 aaKnown RBP15.93■□□□□ 0.14
COMMD4-216ENST00000567023 PCDHGC5Q9Y5F6 944 aa15.93■□□□□ 0.14
COMMD4-216ENST00000567023 ASAP2O43150 1006 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 LYPLA2O95372 231 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 KRT17Q04695 432 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 ST3GAL1Q11201 340 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 CLUL1Q15846 466 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 TWF2Q6IBS0 349 aaKnown RBP15.92■□□□□ 0.14
COMMD4-216ENST00000567023 NCAPH2Q6IBW4 605 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 SRGAP1Q7Z6B7 1085 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 DIS3L2Q8IYB7 885 aaKnown RBP15.92■□□□□ 0.14
COMMD4-216ENST00000567023 RNF169Q8NCN4 708 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 HELQQ8TDG4 1101 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 TCP11Q8WWU5 503 aa15.92■□□□□ 0.14
COMMD4-216ENST00000567023 DYDC2Q96IM9 177 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms