RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 STAMQ92783 540 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 NXPE3Q969Y0 559 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 ADAMTS10Q9H324 1103 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 ARHGEF3Q9NR81 526 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 EPS15L1Q9UBC2 864 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 SIT1Q9Y3P8 196 aa19.09■□□□□ 0.65
CDH3-205ENST00000566808 DDX39AO00148 427 aaKnown RBP19.08■□□□□ 0.64
CDH3-205ENST00000566808 MAGEB2O15479 319 aa19.08■□□□□ 0.64
CDH3-205ENST00000566808 ATP4AP20648 1035 aa19.08■□□□□ 0.64
CDH3-205ENST00000566808 ANTXR2P58335 489 aa19.08■□□□□ 0.64
CDH3-205ENST00000566808 GPR161Q8N6U8 529 aaKnown RBP19.08■□□□□ 0.64
CDH3-205ENST00000566808 BCL7CQ8WUZ0 217 aaPredicted RBP19.08■□□□□ 0.64
CDH3-205ENST00000566808 RSAD2Q8WXG1 361 aa19.08■□□□□ 0.64
CDH3-205ENST00000566808 BORCS6Q96GS4 357 aa19.08■□□□□ 0.64
CDH3-205ENST00000566808 RHOBTB2Q9BYZ6 727 aa19.08■□□□□ 0.64
CDH3-205ENST00000566808 LY9Q9HBG7 655 aa19.08■□□□□ 0.64
CDH3-205ENST00000566808 NCDNQ9UBB6 729 aa19.08■□□□□ 0.64
CDH3-205ENST00000566808 CLUHO75153 1309 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 E7EWF7 191 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 MEIS1O00470 390 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 SPTLC1O15269 473 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 TMOD1P28289 359 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 GBP2P32456 591 aaPredicted RBP19.07■□□□□ 0.64
CDH3-205ENST00000566808 ST3GAL2Q16842 350 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 KIAA0319Q5VV43 1072 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 SWSAP1Q6NVH7 229 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 CYP26C1Q6V0L0 522 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 NIPA1Q7RTP0 329 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 HEATR3Q7Z4Q2 680 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 LINC01465Q8N7H1 131 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 MYH15Q9Y2K3 1946 aa19.07■□□□□ 0.64
CDH3-205ENST00000566808 FOSP01100 380 aaPredicted RBP19.06■□□□□ 0.64
CDH3-205ENST00000566808 DARSP14868 501 aaKnown RBP19.06■□□□□ 0.64
CDH3-205ENST00000566808 KLRC2P26717 231 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 ELMSAN1Q6PJG2 1045 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 GLB1LQ6UWU2 654 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 MB21D2Q8IYB1 491 aaPredicted RBP19.06■□□□□ 0.64
CDH3-205ENST00000566808 SLC44A3Q8N4M1 653 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 PJA1Q8NG27 643 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 GPR152Q8TDT2 470 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 SCLT1Q96NL6 688 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 KLHL5Q96PQ7 755 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 VN1R3Q9BXE9 311 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 WDR6Q9NNW5 1121 aaKnown RBP19.06■□□□□ 0.64
CDH3-205ENST00000566808 TBC1D13Q9NVG8 400 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 CDV3Q9UKY7 258 aaKnown RBP19.06■□□□□ 0.64
CDH3-205ENST00000566808 MAFBQ9Y5Q3 323 aaPredicted RBP19.06■□□□□ 0.64
CDH3-205ENST00000566808 TAF6LQ9Y6J9 622 aa19.06■□□□□ 0.64
CDH3-205ENST00000566808 CEP295Q9C0D2 2601 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 GALTP07902 379 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 CNPP09543 421 aaKnown RBP19.05■□□□□ 0.64
CDH3-205ENST00000566808 SREBF1P36956 1147 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 GPC3P51654 580 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 LMNB2Q03252 620 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 ZNF528Q3MIS6 628 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 VARS2Q5ST30 1063 aaKnown RBP19.05■□□□□ 0.64
CDH3-205ENST00000566808 CMTR1Q8N1G2 835 aaKnown RBP19.05■□□□□ 0.64
CDH3-205ENST00000566808 PGBD1Q96JS3 809 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 FAM167AQ96KS9 214 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 TRAIPQ9BWF2 469 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 ANO3Q9BYT9 981 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 NRDE2Q9H7Z3 1164 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 MAN1C1Q9NR34 630 aa19.05■□□□□ 0.64
CDH3-205ENST00000566808 MTCL1Q9Y4B5 1905 aaKnown RBP19.05■□□□□ 0.64
CDH3-205ENST00000566808 hCG_1642624A0A1W2PR95 340 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 PRR5-ARHGAP8B1AHC4 643 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 CALM1P0DP23 149 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 CALM2P0DP24 149 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 CALM3P0DP25 149 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 PHKA2P46019 1235 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 ATXN1P54253 815 aaKnown RBP19.04■□□□□ 0.64
CDH3-205ENST00000566808 ARHGAP8P85298 464 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 RNASELQ05823 741 aaKnown RBP19.04■□□□□ 0.64
CDH3-205ENST00000566808 NOMO2Q5JPE7 1267 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 EFCAB12Q6NXP0 572 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 PPP1R18Q6NYC8 613 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 CHD1LQ86WJ1 897 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 LRRC71Q8N4P6 559 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 MTA3Q9BTC8 594 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 RIC8AQ9NPQ8 531 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 SLC2A4RGQ9NR83 387 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 DPP7Q9UHL4 492 aa19.04■□□□□ 0.64
CDH3-205ENST00000566808 POTEMA6NI47 508 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 IPO5O00410 1097 aaKnown RBP19.03■□□□□ 0.64
CDH3-205ENST00000566808 DHX15O43143 795 aaKnown RBP19.03■□□□□ 0.64
CDH3-205ENST00000566808 SKIP12755 728 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 GLULP15104 373 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 ZNF76P36508 570 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 SLC11A1P49279 550 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 AP3B2Q13367 1082 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 ZNF746Q6NUN9 644 aaPredicted RBP19.03■□□□□ 0.64
CDH3-205ENST00000566808 DCLRE1AQ6PJP8 1040 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 POTEGQ6S5H5 508 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 CASC1Q6TDU7 716 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 SMAP1Q8IYB5 467 aaPredicted RBP19.03■□□□□ 0.64
CDH3-205ENST00000566808 MAML2Q8IZL2 1156 aaPredicted RBP19.03■□□□□ 0.64
CDH3-205ENST00000566808 SECISBP2LQ93073 1101 aaKnown RBP19.03■□□□□ 0.64
CDH3-205ENST00000566808 MYADMQ96S97 322 aa19.03■□□□□ 0.64
CDH3-205ENST00000566808 CHST12Q9NRB3 414 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms