RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 LRRC45Q96CN5 670 aa18.23■□□□□ 0.51
CMTM3-213ENST00000566756 WRNIP1Q96S55 665 aa18.23■□□□□ 0.51
CMTM3-213ENST00000566756 SSC5DA1L4H1 1573 aa18.23■□□□□ 0.51
CMTM3-213ENST00000566756 A0A087WUV0 522 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-213ENST00000566756 CCDC172P0C7W6 258 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 NOP2P46087 812 aaKnown RBP18.22■□□□□ 0.51
CMTM3-213ENST00000566756 SLC30A5Q8TAD4 765 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 PICK1Q9NRD5 415 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 FBXO28Q9NVF7 368 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 NCANO14594 1321 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 ZSCAN5CA6NGD5 496 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-213ENST00000566756 RSPH10B2B2RC85 870 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 FAM13AO94988 1023 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 RSPH10BP0C881 870 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 FDX1P10109 184 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 PTPRAP18433 802 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 ZNF76P36508 570 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 ZNF131P52739 623 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 BACE1P56817 501 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 PPP2R5AQ15172 486 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 ENOX2Q16206 610 aaKnown RBP18.22■□□□□ 0.51
CMTM3-213ENST00000566756 TCERG1LQ5VWI1 586 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 C9orf131Q5VYM1 1079 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 C1orf186Q6ZWK4 172 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 PEX26Q7Z412 305 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 METTL13Q8N6R0 699 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 ZNF280CQ8ND82 737 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 ATP6V1G3Q96LB4 118 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 PAGR1Q9BTK6 254 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 STK33Q9BYT3 514 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 ZMYM2Q9UBW7 1377 aa18.22■□□□□ 0.51
CMTM3-213ENST00000566756 ESYT3A0FGR9 886 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 DDX3XO00571 662 aaKnown RBP eCLIP18.21■□□□□ 0.512e-10■■■□□ 18.2
CMTM3-213ENST00000566756 CEP104O60308 925 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 KRT14P02533 472 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 ICAM1P05362 532 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 RFX1P22670 979 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 SOX5P35711 763 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 CASP4P49662 377 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 MYBPC2Q14324 1141 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 CLUL1Q15846 466 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 PPP2R5EQ16537 467 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 PRAMEF18Q5VWM3 479 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 B4GALNT4Q76KP1 1039 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 OTOP1Q7RTM1 612 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 LDHDQ86WU2 507 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 FAM186BQ8IYM0 893 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 SEC14L1Q92503 715 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 HES6Q96HZ4 224 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 C12orf42Q96LP6 360 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 UIMC1Q96RL1 719 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 PNMA2Q9UL42 364 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 ODF2LQ9ULJ1 636 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 FRMPD4Q14CM0 1322 aa18.21■□□□□ 0.51
CMTM3-213ENST00000566756 C19orf81C9J6K1 198 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 EML1O00423 815 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 PSMD10O75832 226 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 ECHS1P30084 290 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 CCT5P48643 541 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 DNA2P51530 1060 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 ERVK-9P63128 1117 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 SPP2Q13103 211 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 CCDC174Q6PII3 467 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 NT5DC3Q86UY8 548 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 SLC5A5Q92911 643 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 ZKSCAN4Q969J2 545 aaPredicted RBP18.21■□□□□ 0.5
CMTM3-213ENST00000566756 L3MBTL3Q96JM7 780 aaPredicted RBP18.21■□□□□ 0.5
CMTM3-213ENST00000566756 PARVGQ9HBI0 331 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 DMAC2Q9NW81 257 aa18.21■□□□□ 0.5
CMTM3-213ENST00000566756 NOC2LQ9Y3T9 749 aaKnown RBP18.21■□□□□ 0.5
CMTM3-213ENST00000566756 LOXHD1Q8IVV2 1947 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 GCOM1H8Y6P7 765 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-213ENST00000566756 SART1O43290 800 aaKnown RBP18.2■□□□□ 0.5
CMTM3-213ENST00000566756 TMEM253P0C7T8 217 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 POLR2MP0CAP2 368 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 VCAM1P19320 739 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 CYP4A11Q02928 519 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 MTMR2Q13614 643 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 MTMR3Q13615 1198 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 SPDYCQ5MJ68 293 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 DPY19L2Q6NUT2 758 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 KLHL7Q8IXQ5 586 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 ARFGAP2Q8N6H7 521 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 CCDC26Q8TAB7 109 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 VTI1AQ96AJ9 217 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 SYT11Q9BT88 431 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 EHMT1Q9H9B1 1298 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 RLFQ13129 1914 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 PAPPA2Q9BXP8 1791 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 ZNF536O15090 1300 aa18.2■□□□□ 0.5
CMTM3-213ENST00000566756 F8VZ95 297 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 SLITRK3O94933 977 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 NR1D1P20393 614 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 FMO5P49326 533 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 GUCY2FP51841 1108 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 GHRHRQ02643 423 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 HS2ST1Q7LGA3 356 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 SLC9A9Q8IVB4 645 aa18.19■□□□□ 0.5
CMTM3-213ENST00000566756 SAMD3Q8N6K7 520 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms