RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 IFT122Q9HBG6 1241 aa14.11□□□□□ -0.15
LPCAT4-206ENST00000566581 TUFT1Q9NNX1 390 aa14.11□□□□□ -0.15
LPCAT4-206ENST00000566581 DACT1Q9NYF0 836 aa14.11□□□□□ -0.15
LPCAT4-206ENST00000566581 NOL7Q9UMY1 257 aaKnown RBP14.11□□□□□ -0.15
LPCAT4-206ENST00000566581 COL4A3BPQ9Y5P4 624 aa14.11□□□□□ -0.15
LPCAT4-206ENST00000566581 MRPL42Q9Y6G3 142 aaKnown RBP14.11□□□□□ -0.15
LPCAT4-206ENST00000566581 POTEMA6NI47 508 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 HOXA2O43364 376 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 CSDE1O75534 798 aaKnown RBP14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 MUTP22033 750 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 TOB1P50616 345 aaPredicted RBP14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 POU5F1BQ06416 359 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 LAMTOR4Q0VGL1 99 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 MXD4Q14582 209 aaPredicted RBP14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 EMC2Q15006 297 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 SKIV2LQ15477 1246 aaKnown RBP14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 TIGD5Q53EQ6 642 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 FAM102BQ5T8I3 360 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 SRGAP1Q7Z6B7 1085 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 FERMT3Q86UX7 667 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 ECHDC2Q86YB7 292 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 KSR1Q8IVT5 923 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 HLA-CQ95604 372 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 POLR3CQ9BUI4 534 aaPredicted RBP14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 PLAGL2Q9UPG8 496 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 MYH11P35749 1972 aa14.1□□□□□ -0.15
LPCAT4-206ENST00000566581 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 TBKBP1A7MCY6 615 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 DGAT1O75907 488 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 FGFR4P22455 802 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 RPA1P27694 616 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 TECP42680 631 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 RARRES1P49788 294 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 GATMP50440 423 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 PDIA5Q14554 519 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 PCBP1Q15365 356 aaKnown RBP eCLIP14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 PAN2Q504Q3 1202 aaKnown RBP14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 ZNF598Q86UK7 904 aaKnown RBP14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 CATSPER3Q86XQ3 398 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 RSPH1Q8WYR4 309 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 TMEM143Q96AN5 459 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 NLRP4Q96MN2 994 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 MTRQ99707 1265 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 BACH2Q9BYV9 841 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 TMEM117Q9H0C3 514 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 XPNPEP1Q9NQW7 623 aa14.09□□□□□ -0.15
LPCAT4-206ENST00000566581 LAD1O00515 517 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 GRM6O15303 877 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 ZNF623O75123 536 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 FGFR1P11362 822 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 SKIP12755 728 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 GJB2P29033 226 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 COL19A1Q14993 1142 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 ERMNQ8TAM6 284 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 SPPL3Q8TCT6 385 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 PIGOQ8TEQ8 1089 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 CASD1Q96PB1 797 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 NACC1Q96RE7 527 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 NSUN3Q9H649 340 aaKnown RBP14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 RNF19AQ9NV58 838 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 DBR1Q9UK59 544 aaKnown RBP14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 C5orf42Q9H799 3197 aa14.08□□□□□ -0.16
LPCAT4-206ENST00000566581 NCK2O43639 380 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 MED24O75448 989 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 ITGB1P05556 798 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 SRGAP2CP0DJJ0 459 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 BMP1P13497 986 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 ATF7P17544 494 aaPredicted RBP14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 ARL2P36404 184 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 PRPHP41219 470 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 PHKA2P46019 1235 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 TFF2Q03403 129 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 PTGDRQ13258 359 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 CAMK1Q14012 370 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 RILPL1Q5EBL4 403 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 CATSPER4Q7RTX7 472 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 IGSF22Q8N9C0 903 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 KLHL23Q8NBE8 558 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 RNF149Q8NC42 400 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 CWH43Q9H720 699 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 ALG13Q9NP73 1137 aaKnown RBP14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 AGPAT5Q9NUQ2 364 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 TYW1Q9NV66 732 aaKnown RBP14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 PCDHB6Q9Y5E3 794 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 PCDHB12Q9Y5F1 795 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 STK24Q9Y6E0 443 aa14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 TDRD15B5MCY1 1934 aaKnown RBP14.07□□□□□ -0.16
LPCAT4-206ENST00000566581 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
LPCAT4-206ENST00000566581 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
LPCAT4-206ENST00000566581 HOXA11P31270 313 aaPredicted RBP14.06□□□□□ -0.16
LPCAT4-206ENST00000566581 RAB27AP51159 221 aa14.06□□□□□ -0.16
LPCAT4-206ENST00000566581 PTENP60484 403 aa14.06□□□□□ -0.16
LPCAT4-206ENST00000566581 UBE3AQ05086 875 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms