RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 FDXACB1Q9BRP7 624 aaPredicted RBP21.17■□□□□ 0.98
ABCA3-204ENST00000566200 TM6SF1Q9BZW5 370 aa21.17■□□□□ 0.98
ABCA3-204ENST00000566200 ENTPD7Q9NQZ7 604 aa21.17■□□□□ 0.98
ABCA3-204ENST00000566200 SPG21Q9NZD8 308 aa21.17■□□□□ 0.98
ABCA3-204ENST00000566200 PUF60Q9UHX1 559 aaKnown RBP21.17■□□□□ 0.98
ABCA3-204ENST00000566200 FSD2A1L4K1 749 aa21.16■□□□□ 0.98
ABCA3-204ENST00000566200 EML1O00423 815 aa21.16■□□□□ 0.98
ABCA3-204ENST00000566200 PPM1AP35813 382 aa21.16■□□□□ 0.98
ABCA3-204ENST00000566200 INF2Q27J81 1249 aa21.16■□□□□ 0.98
ABCA3-204ENST00000566200 RPGRIP1Q96KN7 1286 aa21.16■□□□□ 0.98
ABCA3-204ENST00000566200 NGRNQ9NPE2 291 aaKnown RBP21.16■□□□□ 0.98
ABCA3-204ENST00000566200 DDX25Q9UHL0 483 aaKnown RBP21.16■□□□□ 0.98
ABCA3-204ENST00000566200 KCNJ14Q9UNX9 436 aa21.16■□□□□ 0.98
ABCA3-204ENST00000566200 CPLX1O14810 134 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 DTNBO60941 627 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 TECP42680 631 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 NHLH1Q02575 133 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 NONOQ15233 471 aaKnown RBP eCLIP21.15■□□□□ 0.98
ABCA3-204ENST00000566200 PLA2G4FQ68DD2 849 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 LLGL2Q6P1M3 1020 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 TRIM67Q6ZTA4 783 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 BMP8AQ7Z5Y6 402 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 KSR1Q8IVT5 923 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 TRAIPQ9BWF2 469 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 APOL5Q9BWW9 433 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 GCOM2Q9BZD3 368 aaPredicted RBP21.15■□□□□ 0.98
ABCA3-204ENST00000566200 DACT1Q9NYF0 836 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 CDH22Q9UJ99 828 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 VAV3Q9UKW4 847 aa21.15■□□□□ 0.98
ABCA3-204ENST00000566200 KMT2EQ8IZD2 1858 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 MEIS3P2A8K0S8 358 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 NT5C1B-RDH14C9J2C7 533 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 MAFO75444 373 aaPredicted RBP21.14■□□□□ 0.97
ABCA3-204ENST00000566200 PHKA2P46019 1235 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 BCAR1P56945 870 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 ZXDAP98168 799 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 KRT17Q04695 432 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 GALNT17Q6IS24 598 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 TMC7Q7Z402 723 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 ALYREFQ86V81 257 aaKnown RBP21.14■□□□□ 0.97
ABCA3-204ENST00000566200 TMEM173Q86WV6 379 aaPredicted RBP21.14■□□□□ 0.97
ABCA3-204ENST00000566200 FAM177A1Q8N128 213 aaPredicted RBP21.14■□□□□ 0.97
ABCA3-204ENST00000566200 ZNF579Q8NAF0 562 aaKnown RBP21.14■□□□□ 0.97
ABCA3-204ENST00000566200 LPPQ93052 612 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 PHF20Q9BVI0 1012 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 KCNH6Q9H252 994 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 KCNMB3Q9NPA1 279 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 CHST12Q9NRB3 414 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 GJB4Q9NTQ9 266 aa21.14■□□□□ 0.97
ABCA3-204ENST00000566200 SUCLA2Q9P2R7 463 aaPredicted RBP21.14■□□□□ 0.97
ABCA3-204ENST00000566200 WRAP73Q9P2S5 460 aaPredicted RBP21.14■□□□□ 0.97
ABCA3-204ENST00000566200 TMEM221A6NGB7 291 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 C2orf71A6NGG8 1288 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 DDX11L8A8MPP1 907 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 M0R296 226 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 PSMC5P62195 406 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 SCRN1Q12765 414 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 PPP2R5CQ13362 524 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 KRT25Q7Z3Z0 450 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 ZNF410Q86VK4 478 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 RHPN2Q8IUC4 686 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 MRPL43Q8N983 215 aaKnown RBP21.13■□□□□ 0.97
ABCA3-204ENST00000566200 MFSD14AQ96MC6 490 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 ARID2Q68CP9 1835 aa21.13■□□□□ 0.97
ABCA3-204ENST00000566200 DNM2P50570 870 aa21.12■□□□□ 0.97
ABCA3-204ENST00000566200 NPEPPSP55786 919 aa21.12■□□□□ 0.97
ABCA3-204ENST00000566200 CDC42EP1Q00587 391 aa21.12■□□□□ 0.97
ABCA3-204ENST00000566200 SMC1AQ14683 1233 aaKnown RBP21.12■□□□□ 0.97
ABCA3-204ENST00000566200 LETM2Q2VYF4 491 aa21.12■□□□□ 0.97
ABCA3-204ENST00000566200 LONRF3Q496Y0 759 aa21.12■□□□□ 0.97
ABCA3-204ENST00000566200 BCL7CQ8WUZ0 217 aaPredicted RBP21.12■□□□□ 0.97
ABCA3-204ENST00000566200 MRPL9Q9BYD2 267 aaKnown RBP21.12■□□□□ 0.97
ABCA3-204ENST00000566200 IFT122Q9HBG6 1241 aa21.12■□□□□ 0.97
ABCA3-204ENST00000566200 PDRG1Q9NUG6 133 aa21.12■□□□□ 0.97
ABCA3-204ENST00000566200 HCFC2Q9Y5Z7 792 aa21.12■□□□□ 0.97
ABCA3-204ENST00000566200 CLASP2O75122 1294 aaKnown RBP21.11■□□□□ 0.97
ABCA3-204ENST00000566200 SRGAP2BP0DMP2 458 aa21.11■□□□□ 0.97
ABCA3-204ENST00000566200 SFPQP23246 707 aaKnown RBP eCLIP21.11■□□□□ 0.97
ABCA3-204ENST00000566200 TWF2Q6IBS0 349 aaKnown RBP21.11■□□□□ 0.97
ABCA3-204ENST00000566200 OXER1Q8TDS5 423 aa21.11■□□□□ 0.97
ABCA3-204ENST00000566200 NLRP4Q96MN2 994 aa21.11■□□□□ 0.97
ABCA3-204ENST00000566200 CYP26B1Q9NR63 512 aa21.11■□□□□ 0.97
ABCA3-204ENST00000566200 FAM105AQ9NUU6 356 aa21.11■□□□□ 0.97
ABCA3-204ENST00000566200 PIN4Q9Y237 131 aaKnown RBP21.11■□□□□ 0.97
ABCA3-204ENST00000566200 B4GALT3O60512 393 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 HOXB8P17481 243 aaPredicted RBP21.1■□□□□ 0.97
ABCA3-204ENST00000566200 QARSP47897 775 aaKnown RBP21.1■□□□□ 0.97
ABCA3-204ENST00000566200 ALDH7A1P49419 539 aaKnown RBP21.1■□□□□ 0.97
ABCA3-204ENST00000566200 EARS2Q5JPH6 523 aaKnown RBP21.1■□□□□ 0.97
ABCA3-204ENST00000566200 IER5LQ5T953 404 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 PPP4R3AQ6IN85 833 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 CPLX2Q6PUV4 134 aaKnown RBP21.1■□□□□ 0.97
ABCA3-204ENST00000566200 AUTS2Q8WXX7 1259 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 HAS1Q92839 578 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 PBXIP1Q96AQ6 731 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 FAM20AQ96MK3 541 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 ZBP1Q9H171 429 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 NRDE2Q9H7Z3 1164 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 TBC1D13Q9NVG8 400 aa21.1■□□□□ 0.97
ABCA3-204ENST00000566200 STK36Q9NRP7 1315 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms