RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CRYBB1P53674 252 aaPredicted RBP13.96□□□□□ -0.17
SF3B3-206ENST00000565990 GPNMBQ14956 572 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 TPRNQ4KMQ1 711 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 FAM102BQ5T8I3 360 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 FAM43BQ6ZT52 329 aaPredicted RBP13.96□□□□□ -0.17
SF3B3-206ENST00000565990 MAEAQ7L5Y9 396 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 ASAP3Q8TDY4 903 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 DRC1Q96MC2 740 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 REEP2Q9BRK0 252 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 NFKBIZQ9BYH8 718 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 FAM49AQ9H0Q0 323 aaPredicted RBP13.96□□□□□ -0.17
SF3B3-206ENST00000565990 HIPK3Q9H422 1215 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 CDHR5Q9HBB8 845 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 POLD4Q9HCU8 107 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 GPRC5CQ9NQ84 441 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 DACT1Q9NYF0 836 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 COL4A3BPQ9Y5P4 624 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 SQORQ9Y6N5 450 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 TNRC18O15417 2968 aaPredicted RBP13.96□□□□□ -0.17
SF3B3-206ENST00000565990 RSPH10B2B2RC85 870 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 GTPBP6O43824 516 aaPredicted RBP13.95□□□□□ -0.18
SF3B3-206ENST00000565990 KLRC4O43908 158 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 PARNO95453 639 aaKnown RBP13.95□□□□□ -0.18
SF3B3-206ENST00000565990 VTNP04004 478 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 RSPH10BP0C881 870 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 PLS3P13797 630 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 SELPP16109 830 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 AFMP43652 599 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 NLRP11P59045 1033 aaKnown RBP13.95□□□□□ -0.18
SF3B3-206ENST00000565990 MRPS6P82932 125 aaKnown RBP13.95□□□□□ -0.18
SF3B3-206ENST00000565990 EHHADHQ08426 723 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 DPYDQ12882 1025 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 CUL4BQ13620 913 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 DYMQ7RTS9 669 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 ZNF410Q86VK4 478 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 RHPN2Q8IUC4 686 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 KSR1Q8IVT5 923 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 SPIRE2Q8WWL2 714 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 BSNDQ8WZ55 320 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 DPF3Q92784 378 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 MAP7D2Q96T17 732 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 POLR3FQ9H1D9 316 aaPredicted RBP13.95□□□□□ -0.18
SF3B3-206ENST00000565990 AKT3Q9Y243 479 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 SCN5AQ14524 2016 aa13.95□□□□□ -0.18
SF3B3-206ENST00000565990 UMODL1Q5DID0 1318 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 SFI1A8K8P3 1242 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 RRP9O43818 475 aaKnown RBP13.94□□□□□ -0.18
SF3B3-206ENST00000565990 CAVIN2O95810 425 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 MAPTP10636 758 aaKnown RBP13.94□□□□□ -0.18
SF3B3-206ENST00000565990 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
SF3B3-206ENST00000565990 CYP2C18P33260 490 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 NAMPTP43490 491 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 NPTX2P47972 431 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 SARSP49591 514 aaKnown RBP13.94□□□□□ -0.18
SF3B3-206ENST00000565990 PTENP60484 403 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 RAD51AP2Q09MP3 1159 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 TMEM62Q0P6H9 643 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 CAPSQ13938 189 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 MBTPS1Q14703 1052 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 PPP2R5AQ15172 486 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 LRRC8DQ7L1W4 858 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 GRAMD1CQ8IYS0 662 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 USP38Q8NB14 1042 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 VWCEQ96DN2 955 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 CCDC34Q96HJ3 373 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 FIZ1Q96SL8 496 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 WNT8AQ9H1J5 351 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 ST6GALNAC4Q9H4F1 302 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 LARSQ9P2J5 1176 aaKnown RBP13.94□□□□□ -0.18
SF3B3-206ENST00000565990 TRPV2Q9Y5S1 764 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 CDY2AQ9Y6F7 541 aa13.94□□□□□ -0.18
SF3B3-206ENST00000565990 TANC1Q9C0D5 1861 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 LTBP2Q14767 1821 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 A0A087WZ62 844 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 M0QZ92 97 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 CXCL10P02778 98 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 KRT18P05783 430 aaKnown RBP13.93□□□□□ -0.18
SF3B3-206ENST00000565990 SRGAP2CP0DJJ0 459 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 GAP43P17677 238 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 SCP2P22307 547 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 CASP1P29466 404 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 RFC2P35250 354 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 TFDP1Q14186 410 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 KIZQ2M2Z5 673 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 CDCA2Q69YH5 1023 aaPredicted RBP13.93□□□□□ -0.18
SF3B3-206ENST00000565990 MFSD5Q6N075 450 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 UNC13DQ70J99 1090 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 SRGAP1Q7Z6B7 1085 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 C7orf61Q8IZ16 206 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 IFT74Q96LB3 600 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 FDXACB1Q9BRP7 624 aaPredicted RBP13.93□□□□□ -0.18
SF3B3-206ENST00000565990 STRA6Q9BX79 667 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 OSBPL7Q9BZF2 842 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 TMEM134Q9H6X4 195 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 PARVGQ9HBI0 331 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 PANK4Q9NVE7 773 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms