RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 FBXO46Q6PJ61 603 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 SPOCD1Q6ZMY3 1216 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SEPT14Q6ZU15 432 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PDZD4Q76G19 769 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 SLC9B2Q86UD5 537 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 NOSTRINQ8IVI9 506 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 NRSN1Q8IZ57 195 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 C17orf53Q8N3J3 647 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 PPM1KQ8N3J5 372 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ZBTB8BQ8NAP8 495 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 FBXO27Q8NI29 283 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 NEK9Q8TD19 979 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 KCTD12Q96CX2 325 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 TMEM74Q96NL1 305 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 P2RX7Q99572 595 aaKnown RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 SLC6A16Q9GZN6 736 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 RNF38Q9H0F5 515 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 TAF1DQ9H5J8 278 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 HPS4Q9NQG7 708 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 ARGLU1Q9NWB6 273 aaPredicted RBP3.38□□□□□ -1.87
CHD9-216ENST00000565803 MCM9Q9NXL9 1143 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 GPRC5BQ9NZH0 403 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 KLK14Q9P0G3 267 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 PKD2L1Q9P0L9 805 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 POGKQ9P215 609 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 VPS28Q9UK41 221 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 SIK3Q9Y2K2 1263 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 KNSTRNQ9Y448 316 aa3.38□□□□□ -1.87
CHD9-216ENST00000565803 MYH14Q7Z406 1995 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 A0A1W2PPH5 198 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CTAGE9A4FU28 777 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 RNF223E7ERA6 249 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 MTSS1O43312 755 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 SIN3BO75182 1162 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 GCP02774 474 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CYP11A1P05108 521 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 PARP1P09874 1014 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 ALAS1P13196 640 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TRIM21P19474 475 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 ATP5OP48047 213 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 PAPOLAP51003 745 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 SLC7A5Q01650 507 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 GEN1Q17RS7 908 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 DACT2Q5SW24 774 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 HECTD3Q5T447 861 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 FAM117BQ6P1L5 589 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ALKBH5Q6P6C2 394 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 LRRC69Q6ZNQ3 347 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 LPCAT2Q7L5N7 544 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 NECAB2Q7Z6G3 386 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 UNC45BQ8IWX7 931 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 FAM178BQ8IXR5 827 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 NXPE1Q8N323 547 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ANKRD52Q8NB46 1076 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ZNF280CQ8ND82 737 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TGFBRAP1Q8WUH2 860 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 BAP1Q92560 729 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 HSPH1Q92598 858 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 RILPL2Q969X0 211 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ASIC4Q96FT7 647 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 AHCYL2Q96HN2 611 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 CAPNS2Q96L46 248 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 MAP7D2Q96T17 732 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 KRT23Q9C075 422 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 LRRCC1Q9C099 1032 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 NACA2Q9H009 215 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ELAC1Q9H777 363 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 CCDC177Q9NQR7 707 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 STRN4Q9NRL3 753 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 RRP7BPQ9NSQ0 103 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 PIM2Q9P1W9 311 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 WDR35Q9P2L0 1181 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 STAP2Q9UGK3 403 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 GIT1Q9Y2X7 761 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CACNA1SQ13698 1873 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 SYNJ2BP-COX16A0A087WUM0 186 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 A0A0B4J203 849 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 RHPN2P1A8MT19 583 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TPP1O14773 563 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 SPTLC2O15270 562 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 SNX4O95219 450 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TMEM11P17152 192 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 PSMA4P25789 261 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 RECQLP46063 649 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 IFNAR2P48551 515 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CENPAP49450 140 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 AFF3P51826 1226 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 ARF3P61204 181 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 NUCB2P80303 420 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ARF1P84077 181 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 ARID5BQ14865 1188 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 LRIT3Q3SXY7 679 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 RABL6Q3YEC7 729 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 FIP1L1Q6UN15 594 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 CYP26C1Q6V0L0 522 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 NLRP13Q86W25 1043 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 DZIP1LQ8IYY4 767 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 ZBTB34Q8NCN2 500 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 RSAD2Q8WXG1 361 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ZNF75CPQ92670 426 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms