RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TNFRSF18Q9Y5U5 241 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 LCHNA4D1U4 455 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 PLSCR1O15162 318 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 PPFIA2O75334 1257 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 CHGBP05060 677 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 CYP17A1P05093 508 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 SDHAP31040 664 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 SESN3P58005 492 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 VASNQ6EMK4 673 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 PROSER1Q86XN7 944 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 DTX3Q8N9I9 347 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 RTF1Q92541 710 aaKnown RBP6.07□□□□□ -1.44
CHD9-215ENST00000565442 NEIL1Q96FI4 390 aaPredicted RBP6.07□□□□□ -1.44
CHD9-215ENST00000565442 SMAD5Q99717 465 aaKnown RBP6.07□□□□□ -1.44
CHD9-215ENST00000565442 ZMAT4Q9H898 229 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 KLHL42Q9P2K6 505 aa6.07□□□□□ -1.44
CHD9-215ENST00000565442 KNG1P01042 644 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 S100BP04271 92 aaPredicted RBP6.06□□□□□ -1.44
CHD9-215ENST00000565442 ACO1P21399 889 aaKnown RBP6.06□□□□□ -1.44
CHD9-215ENST00000565442 LSP1P33241 339 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 DBPQ10586 325 aaPredicted RBP6.06□□□□□ -1.44
CHD9-215ENST00000565442 HNRNPA0Q13151 305 aaKnown RBP6.06□□□□□ -1.44
CHD9-215ENST00000565442 CD276Q5ZPR3 534 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 C1orf210Q8IVY1 113 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 REXO1L1PQ8IX06 675 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 ZNF610Q8N9Z0 462 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 HIPK4Q8NE63 616 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 AHCYL2Q96HN2 611 aaKnown RBP6.06□□□□□ -1.44
CHD9-215ENST00000565442 C16orf92Q96LL3 132 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 GBP4Q96PP9 640 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 ASPSCR1Q9BZE9 553 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 TRHDEQ9UKU6 1024 aa6.06□□□□□ -1.44
CHD9-215ENST00000565442 NOC2LQ9Y3T9 749 aaKnown RBP6.06□□□□□ -1.44
CHD9-215ENST00000565442 PRAMEF22A3QJZ6 481 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 RAD17O75943 681 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 FBXO21O94952 628 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 C1SP09871 688 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 MC4RP32245 332 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 FNTBP49356 437 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 HERVK_113P62684 666 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 PHC1P78364 1004 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 ODR4Q5SWX8 454 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 Q6ZSN1 163 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 RASSF3Q86WH2 238 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 LDLRAD3Q86YD5 345 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 CMIPQ8IY22 773 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 CRAMP1Q96RY5 1269 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 SLC39A2Q9NP94 309 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 TOPORSQ9NS56 1045 aaPredicted RBP6.05□□□□□ -1.44
CHD9-215ENST00000565442 UCKL1Q9NWZ5 548 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 ARHGAP28Q9P2N2 729 aa6.05□□□□□ -1.44
CHD9-215ENST00000565442 G3BP2Q9UN86 482 aaKnown RBP6.05□□□□□ -1.44
CHD9-215ENST00000565442 ALDH1L1O75891 902 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 CD40P25942 277 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 SCAND1P57086 179 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 FAPQ12884 760 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 LRRC32Q14392 662 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 EPHA7Q15375 998 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 ZNF568Q3ZCX4 644 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 GPR158Q5T848 1215 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 SYDE2Q5VT97 1194 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 POLNQ7Z5Q5 900 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 ZZZ3Q8IYH5 903 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 IL17DQ8TAD2 202 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 CACTINQ8WUQ7 758 aaKnown RBP6.04□□□□□ -1.44
CHD9-215ENST00000565442 ZG16BQ96DA0 208 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 ZNF496Q96IT1 587 aaPredicted RBP6.04□□□□□ -1.44
CHD9-215ENST00000565442 PLEKHG4BQ96PX9 1271 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 ZDHHC5Q9C0B5 715 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 KATNBL1Q9H079 304 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 C14orf119Q9NWQ9 140 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 BTBD7Q9P203 1132 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 MSRAQ9UJ68 235 aa6.04□□□□□ -1.44
CHD9-215ENST00000565442 GOLGA6L22H0YM25 854 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 GABRDO14764 452 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 KDM1AO60341 852 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 ENO2P09104 434 aaPredicted RBP6.03□□□□□ -1.44
CHD9-215ENST00000565442 AOAHP28039 575 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 RAC3P60763 192 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 ERVK-21P61565 698 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 PFKPQ01813 784 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 USP10Q14694 798 aaKnown RBP6.03□□□□□ -1.44
CHD9-215ENST00000565442 PDCD1Q15116 288 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 ABCB5Q2M3G0 1257 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 FRMD7Q6ZUT3 714 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 RTN4RL1Q86UN2 441 aaPredicted RBP6.03□□□□□ -1.44
CHD9-215ENST00000565442 C7orf31Q8N865 590 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 FOXRED1Q96CU9 486 aaPredicted RBP6.03□□□□□ -1.44
CHD9-215ENST00000565442 POFUT1Q9H488 388 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 METTL14Q9HCE5 456 aaKnown RBP6.03□□□□□ -1.44
CHD9-215ENST00000565442 ZFP69BQ9UJL9 534 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 THRAP3Q9Y2W1 955 aaKnown RBP6.03□□□□□ -1.44
CHD9-215ENST00000565442 ASB1Q9Y576 335 aa6.03□□□□□ -1.44
CHD9-215ENST00000565442 UBA6A0AVT1 1052 aaPredicted RBP6.02□□□□□ -1.45
CHD9-215ENST00000565442 GOLGA8AA7E2F4 631 aa6.02□□□□□ -1.45
CHD9-215ENST00000565442 GOLGA8BA8MQT2 603 aa6.02□□□□□ -1.45
CHD9-215ENST00000565442 APOL3O95236 402 aa6.02□□□□□ -1.45
CHD9-215ENST00000565442 ADH4P08319 380 aa6.02□□□□□ -1.45
CHD9-215ENST00000565442 ZNF888P0CJ79 500 aaPredicted RBP6.02□□□□□ -1.45
CHD9-215ENST00000565442 PTGS1P23219 599 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms