RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 ATXN2LQ8WWM7 1075 aaKnown RBP13.7□□□□□ -0.22
SPG7-211ENST00000565370 RSPH1Q8WYR4 309 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 CLP1Q92989 425 aaKnown RBP13.7□□□□□ -0.22
SPG7-211ENST00000565370 MRPL38Q96DV4 380 aaKnown RBP13.7□□□□□ -0.22
SPG7-211ENST00000565370 HSD17B14Q9BPX1 270 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 CHST12Q9NRB3 414 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 AAASQ9NRG9 546 aa13.7□□□□□ -0.22
SPG7-211ENST00000565370 PIN4Q9Y237 131 aaKnown RBP13.7□□□□□ -0.22
SPG7-211ENST00000565370 TBKBP1A7MCY6 615 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 C5orf67F2Z3F1 127 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 TNFRSF10AO00220 468 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 SKIP12755 728 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 MUTP22033 750 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 BMPR1AP36894 532 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 RARRES1P49788 294 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPG7-211ENST00000565370 RAB27AP51159 221 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 DSC3Q14574 896 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 NAALADL2Q58DX5 795 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
SPG7-211ENST00000565370 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 LRRC43Q8N309 656 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 TMEM143Q96AN5 459 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 POLR3CQ9BUI4 534 aaPredicted RBP13.69□□□□□ -0.22
SPG7-211ENST00000565370 LMAN2LQ9H0V9 348 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 COG5Q9UP83 839 aa13.69□□□□□ -0.22
SPG7-211ENST00000565370 MRPL42Q9Y6G3 142 aaKnown RBP13.69□□□□□ -0.22
SPG7-211ENST00000565370 FNDC1Q4ZHG4 1894 aaPredicted RBP13.69□□□□□ -0.22
SPG7-211ENST00000565370 USO1O60763 962 aaKnown RBP13.68□□□□□ -0.22
SPG7-211ENST00000565370 ERLIN2O94905 339 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 XRCC6P12956 609 aaKnown RBP eCLIP13.68□□□□□ -0.22
SPG7-211ENST00000565370 PDCP20941 246 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 FGFR4P22455 802 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 LAMTOR4Q0VGL1 99 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 NBR1Q14596 966 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 PCBP1Q15365 356 aaKnown RBP eCLIP13.68□□□□□ -0.22
SPG7-211ENST00000565370 CSPP1Q1MSJ5 1256 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 CRIPAKQ8N1N5 446 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
SPG7-211ENST00000565370 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 RNF169Q8NCN4 708 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 MCPH1Q8NEM0 835 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 P2RX5Q93086 422 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 PPP2R3CQ969Q6 453 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 NACC1Q96RE7 527 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 MRPL9Q9BYD2 267 aaKnown RBP13.68□□□□□ -0.22
SPG7-211ENST00000565370 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 LRWD1Q9UFC0 647 aa13.68□□□□□ -0.22
SPG7-211ENST00000565370 DBR1Q9UK59 544 aaKnown RBP13.68□□□□□ -0.22
SPG7-211ENST00000565370 ARHGEF35A5YM69 484 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 FGFR1P11362 822 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 LAG3P18627 525 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 RPA1P27694 616 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 CCT6AP40227 531 aaKnown RBP13.67□□□□□ -0.22
SPG7-211ENST00000565370 PRPHP41219 470 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 MRPS5P82675 430 aaKnown RBP13.67□□□□□ -0.22
SPG7-211ENST00000565370 NCBP1Q09161 790 aaKnown RBP13.67□□□□□ -0.22
SPG7-211ENST00000565370 PTGDRQ13258 359 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
SPG7-211ENST00000565370 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 CATSPER3Q86XQ3 398 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 ECHDC2Q86YB7 292 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 KSR1Q8IVT5 923 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 SNX29Q8TEQ0 813 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 PRPF31Q8WWY3 499 aaKnown RBP13.67□□□□□ -0.22
SPG7-211ENST00000565370 NSUN3Q9H649 340 aaKnown RBP13.67□□□□□ -0.22
SPG7-211ENST00000565370 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 PCDHB6Q9Y5E3 794 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 PCDHB12Q9Y5F1 795 aa13.67□□□□□ -0.22
SPG7-211ENST00000565370 A0A0U1RQF3 1178 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 MED24O75448 989 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 CSDE1O75534 798 aaKnown RBP13.66□□□□□ -0.22
SPG7-211ENST00000565370 EOMESO95936 686 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 GATMP50440 423 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 KRT79Q5XKE5 535 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 BRAPQ7Z569 592 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 HLA-CQ95604 372 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 PGBD4Q96DM1 585 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 POLR3FQ9H1D9 316 aaPredicted RBP13.66□□□□□ -0.22
SPG7-211ENST00000565370 IFT122Q9HBG6 1241 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 XPNPEP1Q9NQW7 623 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
SPG7-211ENST00000565370 GTF3C3Q9Y5Q9 886 aa13.66□□□□□ -0.22
SPG7-211ENST00000565370 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
SPG7-211ENST00000565370 CARNS1A5YM72 827 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 ZBTB39O15060 712 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 BMP15O95972 392 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 LINC00271P0C7V0 271 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 SPATA31C1P0DKV0 1188 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 AXLP30530 894 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 PPM1AP35813 382 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 FAM189BP81408 668 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 POU5F1BQ06416 359 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 CUL4AQ13619 759 aa13.65□□□□□ -0.22
SPG7-211ENST00000565370 PDIA5Q14554 519 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms