RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
USB1-210ENST00000565151 CLDND1Q9NY35 253 aa16.49■□□□□ 0.23
USB1-210ENST00000565151 RAPGEFL1Q9UHV5 662 aa16.49■□□□□ 0.23
USB1-210ENST00000565151 TDRD15B5MCY1 1934 aaKnown RBP16.49■□□□□ 0.23
USB1-210ENST00000565151 A0A0U1RQF3 1178 aa16.48■□□□□ 0.23
USB1-210ENST00000565151 GLP2RO95838 553 aa16.48■□□□□ 0.23
USB1-210ENST00000565151 RBM10P98175 930 aaKnown RBP16.48■□□□□ 0.23
USB1-210ENST00000565151 ADAM15Q13444 863 aa16.48■□□□□ 0.23
USB1-210ENST00000565151 ODR4Q5SWX8 454 aa16.48■□□□□ 0.23
USB1-210ENST00000565151 HSD17B14Q9BPX1 270 aa16.48■□□□□ 0.23
USB1-210ENST00000565151 IGFLR1Q9H665 355 aa16.48■□□□□ 0.23
USB1-210ENST00000565151 XPNPEP1Q9NQW7 623 aa16.48■□□□□ 0.23
USB1-210ENST00000565151 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
USB1-210ENST00000565151 FGF18O76093 207 aa16.47■□□□□ 0.23
USB1-210ENST00000565151 YWHABP31946 246 aaKnown RBP16.47■□□□□ 0.23
USB1-210ENST00000565151 CLUL1Q15846 466 aa16.47■□□□□ 0.23
USB1-210ENST00000565151 FAM43BQ6ZT52 329 aaPredicted RBP16.47■□□□□ 0.23
USB1-210ENST00000565151 VN1R2Q8NFZ6 395 aa16.47■□□□□ 0.23
USB1-210ENST00000565151 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
USB1-210ENST00000565151 CEP170P1Q96L14 293 aa16.47■□□□□ 0.23
USB1-210ENST00000565151 NLRP4Q96MN2 994 aa16.47■□□□□ 0.23
USB1-210ENST00000565151 EIF2AK1Q9BQI3 630 aaKnown RBP16.47■□□□□ 0.23
USB1-210ENST00000565151 GCOM2Q9BZD3 368 aaPredicted RBP16.47■□□□□ 0.23
USB1-210ENST00000565151 TMEM117Q9H0C3 514 aa16.47■□□□□ 0.23
USB1-210ENST00000565151 CLEC1BQ9P126 229 aa16.47■□□□□ 0.23
USB1-210ENST00000565151 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
USB1-210ENST00000565151 B4GALT3O60512 393 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 CENPBP07199 599 aaPredicted RBP16.46■□□□□ 0.23
USB1-210ENST00000565151 CALCRLQ16602 461 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 LONRF3Q496Y0 759 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 EP400NLQ6ZTU2 488 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 ZNF710Q8N1W2 664 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 RNF169Q8NCN4 708 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 HELQQ8TDG4 1101 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 LPPQ93052 612 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 MSLNLQ96KJ4 702 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 SCLT1Q96NL6 688 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 NAP1L4Q99733 375 aaKnown RBP16.46■□□□□ 0.23
USB1-210ENST00000565151 TTC12Q9H892 705 aaPredicted RBP16.46■□□□□ 0.23
USB1-210ENST00000565151 C11orf16Q9NQ32 467 aa16.46■□□□□ 0.23
USB1-210ENST00000565151 FSCN2O14926 492 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 PER2O15055 1255 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 SPATA31C1P0DKV0 1188 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 ZSCAN20P17040 1043 aaPredicted RBP16.45■□□□□ 0.22
USB1-210ENST00000565151 HOXA11P31270 313 aaPredicted RBP16.45■□□□□ 0.22
USB1-210ENST00000565151 TXKP42681 527 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 PHKA2P46019 1235 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 AFF1P51825 1210 aaKnown RBP16.45■□□□□ 0.22
USB1-210ENST00000565151 LAMTOR4Q0VGL1 99 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 UBXN11Q5T124 520 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 SPOUT1Q5T280 376 aaKnown RBP16.45■□□□□ 0.22
USB1-210ENST00000565151 RBM23Q86U06 439 aaKnown RBP16.45■□□□□ 0.22
USB1-210ENST00000565151 ZNF410Q86VK4 478 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 TPH2Q8IWU9 490 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 SLFN12Q8IYM2 578 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 TRAIPQ9BWF2 469 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 PCDHA12Q9UN75 941 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 COL4A3BPQ9Y5P4 624 aa16.45■□□□□ 0.22
USB1-210ENST00000565151 POTEMA6NI47 508 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 MBTPS2O43462 519 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 NEMFO60524 1076 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 ATP2B1P20020 1258 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 NRIP1P48552 1158 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 DNM2P50570 870 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 POLGP54098 1239 aaPredicted RBP16.44■□□□□ 0.22
USB1-210ENST00000565151 KCNC3Q14003 757 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 EMC2Q15006 297 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 XKR9Q5GH70 373 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 KCNT2Q6UVM3 1135 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 TMEM173Q86WV6 379 aaPredicted RBP16.44■□□□□ 0.22
USB1-210ENST00000565151 ZSWIM4Q9H7M6 989 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 PCDHB12Q9Y5F1 795 aa16.44■□□□□ 0.22
USB1-210ENST00000565151 WDFY4Q6ZS81 3184 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 MARCH6O60337 910 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 LYPLA2O95372 231 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 CD2BP2O95400 341 aaKnown RBP16.43■□□□□ 0.22
USB1-210ENST00000565151 BAG4O95429 457 aaKnown RBP16.43■□□□□ 0.22
USB1-210ENST00000565151 EOMESO95936 686 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 RFC5P40937 340 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
USB1-210ENST00000565151 PLCB3Q01970 1234 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 ZP2Q05996 745 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 NBR1Q14596 966 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 FERMT3Q86UX7 667 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 THNSL1Q8IYQ7 743 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 EFHBQ8N7U6 833 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 FBXO18Q8NFZ0 1043 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 ASAP3Q8TDY4 903 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 BCL7CQ8WUZ0 217 aaPredicted RBP16.43■□□□□ 0.22
USB1-210ENST00000565151 SLC7A3Q8WY07 619 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 LLPHQ9BRT6 129 aaKnown RBP16.43■□□□□ 0.22
USB1-210ENST00000565151 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 TLR9Q9NR96 1032 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 CHST12Q9NRB3 414 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 AGPAT5Q9NUQ2 364 aa16.43■□□□□ 0.22
USB1-210ENST00000565151 FAM105AQ9NUU6 356 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms