RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 POU5F1BQ06416 359 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 RASIP1Q5U651 963 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 LEO1Q8WVC0 666 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-208ENST00000564703 TMEM40Q8WWA1 233 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 DRC1Q96MC2 740 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 SLC9A7Q96T83 725 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 ZBED2Q9BTP6 218 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-208ENST00000564703 CHMP5Q9NZZ3 219 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 STK17AQ9UEE5 414 aa17.71■□□□□ 0.43
RAB40C-208ENST00000564703 ENPP3O14638 875 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 STAT6P42226 847 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 WDR5P61964 334 aaKnown RBP17.7■□□□□ 0.42
RAB40C-208ENST00000564703 MCM6Q14566 821 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 C1orf186Q6ZWK4 172 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 SV2BQ7L1I2 683 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 CATSPER4Q7RTX7 472 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 PDILTQ8N807 584 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 LARP4BQ92615 738 aaKnown RBP17.7■□□□□ 0.42
RAB40C-208ENST00000564703 RAD54LQ92698 747 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 ERVK-5Q9HDB9 667 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 GPRC5CQ9NQ84 441 aa17.7■□□□□ 0.42
RAB40C-208ENST00000564703 GOLGA6L4A6NEF3 574 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 LRRIQ4A6NIV6 560 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 CSDE1O75534 798 aaKnown RBP17.69■□□□□ 0.42
RAB40C-208ENST00000564703 GLRA2P23416 452 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 SLC12A3P55017 1021 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 AXDND1Q5T1B0 1012 aaPredicted RBP17.69■□□□□ 0.42
RAB40C-208ENST00000564703 ADALQ6DHV7 355 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 FAM228AQ86W67 206 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 GPBP1Q86WP2 473 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 ZBTB8OSQ8IWT0 167 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 MYOCDQ8IZQ8 938 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 IQUBQ8NA54 791 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 DEPTORQ8TB45 409 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 ASAP3Q8TDY4 903 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 PYM1Q9BRP8 204 aaKnown RBP17.69■□□□□ 0.42
RAB40C-208ENST00000564703 IFT122Q9HBG6 1241 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 POLD4Q9HCU8 107 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 TSHZ2Q9NRE2 1034 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 MSRAQ9UJ68 235 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 ARID2Q68CP9 1835 aa17.69■□□□□ 0.42
RAB40C-208ENST00000564703 CCDC169A6NNP5 214 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 INO80B-WBP1J3KQ70 363 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 HIP1RO75146 1068 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 ERLIN2O94905 339 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 GUCY2CP25092 1073 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 PTENP60484 403 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 SMAD3P84022 425 aaKnown RBP17.68■□□□□ 0.42
RAB40C-208ENST00000564703 RAD51AP2Q09MP3 1159 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
RAB40C-208ENST00000564703 TCTN1Q2MV58 587 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 SHC4Q6S5L8 630 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.68■□□□□ 0.42
RAB40C-208ENST00000564703 IPO9Q96P70 1041 aaKnown RBP17.68■□□□□ 0.42
RAB40C-208ENST00000564703 ADAM2Q99965 735 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 RUSC1Q9BVN2 902 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 LRRC27Q9C0I9 530 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 C2orf40Q9H1Z8 148 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 C17orf75Q9HAS0 396 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 CHST12Q9NRB3 414 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 C1orf112Q9NSG2 853 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 BLOC1S4Q9NUP1 217 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 DACT1Q9NYF0 836 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 LRFN2Q9ULH4 789 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 TCHHQ07283 1943 aa17.68■□□□□ 0.42
RAB40C-208ENST00000564703 UPP2O95045 317 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 STAG3L1P0CL83 205 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 FGFR4P22455 802 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 NAMPTP43490 491 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 SMTNP53814 917 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 AMPD3Q01432 767 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 CAPSQ13938 189 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 TPRNQ4KMQ1 711 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 CHAMP1Q96JM3 812 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 NFKBIZQ9BYH8 718 aa17.67■□□□□ 0.42
RAB40C-208ENST00000564703 LARSQ9P2J5 1176 aaKnown RBP17.67■□□□□ 0.42
RAB40C-208ENST00000564703 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-208ENST00000564703 GRXCR1A8MXD5 290 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 IBSPP21815 317 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-208ENST00000564703 CMA1P23946 247 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 EFNA5P52803 228 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 PEX3P56589 373 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 DEFB103AP81534 67 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 DMP1Q13316 513 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-208ENST00000564703 RAB30Q15771 203 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 CSPP1Q1MSJ5 1256 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 RESP18Q5W5W9 173 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 FAM117BQ6P1L5 589 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 SLC24A5Q71RS6 500 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 RTN4RL1Q86UN2 441 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-208ENST00000564703 IFNLR1Q8IU57 520 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-208ENST00000564703 HERC6Q8IVU3 1022 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 TOP1MTQ969P6 601 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 DHX58Q96C10 678 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 TSPYL2Q9H2G4 693 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-208ENST00000564703 TMX1Q9H3N1 280 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 CUEDC2Q9H467 287 aa17.66■□□□□ 0.42
RAB40C-208ENST00000564703 ZHX3Q9H4I2 956 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms