RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 DGAT1O75907 488 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 RB1P06400 928 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 RPA1P27694 616 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 BMPR1AP36894 532 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 PLA2G5P39877 138 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 RARRES1P49788 294 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 FXR2P51116 673 aaKnown RBP eCLIP20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 LAMTOR4Q0VGL1 99 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 CUL4AQ13619 759 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 PTPROQ16827 1216 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 HAUS3Q68CZ6 603 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 CLP1Q92989 425 aaKnown RBP20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 NACC1Q96RE7 527 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 CHST12Q9NRB3 414 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 LRWD1Q9UFC0 647 aa20.44■□□□□ 0.86
SYNGR3-204ENST00000564642 FNDC1Q4ZHG4 1894 aaPredicted RBP20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 TBKBP1A7MCY6 615 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 PDIA5Q14554 519 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 MXD4Q14582 209 aaPredicted RBP20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 FAM102BQ5T8I3 360 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 CATSPER4Q7RTX7 472 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 SRGAP1Q7Z6B7 1085 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 FERMT3Q86UX7 667 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 C11orf84Q9BUA3 381 aaPredicted RBP20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 IFT122Q9HBG6 1241 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 STK24Q9Y6E0 443 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 MRPL42Q9Y6G3 142 aaKnown RBP20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 CHD7Q9P2D1 2997 aa20.43■□□□□ 0.86
SYNGR3-204ENST00000564642 PRRC2BQ5JSZ5 2229 aaKnown RBP20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 C5orf67F2Z3F1 127 aa20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 HOXA2O43364 376 aa20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 MUTP22033 750 aa20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 GATMP50440 423 aa20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 SPOUT1Q5T280 376 aaKnown RBP20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 ECHDC2Q86YB7 292 aa20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 RNF149Q8NC42 400 aa20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 PLVAPQ9BX97 442 aa20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 XPNPEP1Q9NQW7 623 aa20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 DBR1Q9UK59 544 aaKnown RBP20.42■□□□□ 0.86
SYNGR3-204ENST00000564642 A0A0U1RQF3 1178 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 LINC00271P0C7V0 271 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 FGFR1P11362 822 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 CCT6AP40227 531 aaKnown RBP20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 PRPHP41219 470 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 TFDP1Q14186 410 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 TWF2Q6IBS0 349 aaKnown RBP20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 POTEGQ6S5H5 508 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 DTHD1Q6ZMT9 781 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 ABI1Q8IZP0 508 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 RNF169Q8NCN4 708 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 MRPL38Q96DV4 380 aaKnown RBP20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 THEGQ9P2T0 379 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 PIN4Q9Y237 131 aaKnown RBP20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 KIAA1671Q9BY89 1806 aa20.41■□□□□ 0.86
SYNGR3-204ENST00000564642 USO1O60763 962 aaKnown RBP20.4■□□□□ 0.86
SYNGR3-204ENST00000564642 EOMESO95936 686 aa20.4■□□□□ 0.86
SYNGR3-204ENST00000564642 SKIP12755 728 aa20.4■□□□□ 0.86
SYNGR3-204ENST00000564642 PDCP20941 246 aa20.4■□□□□ 0.86
SYNGR3-204ENST00000564642 PHKA2P46019 1235 aa20.4■□□□□ 0.86
SYNGR3-204ENST00000564642 FAM122AQ96E09 287 aa20.4■□□□□ 0.86
SYNGR3-204ENST00000564642 AAASQ9NRG9 546 aa20.4■□□□□ 0.86
SYNGR3-204ENST00000564642 ARHGEF35A5YM69 484 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 ARL2P36404 184 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 NAALADL2Q58DX5 795 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 KRT79Q5XKE5 535 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 MAEAQ7L5Y9 396 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 IGSF22Q8N9C0 903 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 SNX29Q8TEQ0 813 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 ATXN2LQ8WWM7 1075 aaKnown RBP20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 P2RX5Q93086 422 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 TMEM117Q9H0C3 514 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 EYSQ5T1H1 3165 aa20.39■□□□□ 0.85
SYNGR3-204ENST00000564642 VPS37CA5D8V6 355 aaPredicted RBP20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 ERLIN2O94905 339 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 POU5F1BQ06416 359 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 MCPH1Q8NEM0 835 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 CASD1Q96PB1 797 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 TRAIPQ9BWF2 469 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 LMAN2LQ9H0V9 348 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 POLR3FQ9H1D9 316 aaPredicted RBP20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 MINDY3Q9H8M7 445 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 AGPAT5Q9NUQ2 364 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 TYW1Q9NV66 732 aaKnown RBP20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 KIAA1024Q9UPX6 916 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 PCDHB12Q9Y5F1 795 aa20.38■□□□□ 0.85
SYNGR3-204ENST00000564642 TTC28Q96AY4 2481 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 K7ELQ4 463 aaPredicted RBP20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 GRM6O15303 877 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 PTENP60484 403 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 MRPS5P82675 430 aaKnown RBP20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 ATP2C1P98194 919 aaPredicted RBP20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 NCBP1Q09161 790 aaKnown RBP20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 TIGD5Q53EQ6 642 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 PADI6Q6TGC4 694 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 BRAPQ7Z569 592 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 ASAP3Q8TDY4 903 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 INTS4Q96HW7 963 aaKnown RBP20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 FAM105AQ9NUU6 356 aa20.37■□□□□ 0.85
SYNGR3-204ENST00000564642 DDX19AQ9NUU7 478 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms