RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	IK	Q13123	557 aa	Predicted RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	RABGEF1	Q9UJ41	708 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	MINDY4B	A8MYZ0	360 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CHMP2A	O43633	222 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SLC1A1	P43005	524 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	NONO	Q15233	471 aa	Known RBP eCLIP	4.54	□□□□□ -1.68	5e-9	■■■■□ 23.8
MACF1-231	ENST00000564288	TSHZ3	Q63HK5	1081 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	BEST2	Q8NFU1	509 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	KCNV2	Q8TDN2	545 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	NCOA5	Q9HCD5	579 aa	Known RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288		A0A1W2PP64	1363 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	GOLGA8J	A6NMD2	632 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SERPINB1	P30740	379 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	MLH1	P40692	756 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CABP4	P57796	275 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CBX3	Q13185	183 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	CREG2	Q8IUH2	290 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SCUBE1	Q8IWY4	988 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ATP8B4	Q8TF62	1192 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	LRRC2	Q9BYS8	371 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ARIH1	Q9Y4X5	557 aa	Predicted RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	RBM47	A0AV96	593 aa	Known RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PTGDR	Q13258	359 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	THOC7	Q6I9Y2	204 aa	Known RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PYROXD1	Q8WU10	500 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	TTC1	Q99614	292 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	EPS8L2	Q9H6S3	715 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	VPS37B	Q9H9H4	285 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SNX17	Q15036	470 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	RHOT2	Q8IXI1	618 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ZIM3	Q96PE6	472 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	UVRAG	Q9P2Y5	699 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	DAPK3	O43293	454 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	TJP3	O95049	919 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	SKA1	Q96BD8	255 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	PA2G4	Q9UQ80	394 aa	Known RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	FMNL1	O95466	1100 aa	Predicted RBP	4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ZNF423	Q2M1K9	1284 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	UBAP1	Q9NZ09	502 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	MROH1	Q8NDA8	1641 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	MAP3K4	Q9Y6R4	1608 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	DTNB	O60941	627 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	IFNAR2	P48551	515 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	AGAP11	Q8TF27	550 aa		4.54	□□□□□ -1.68
MACF1-231	ENST00000564288	ATP1A1	P05023	1023 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	LRRC34	Q8IZ02	419 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	PPWD1	Q96BP3	646 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	DISC1	Q9NRI5	854 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	STX18	Q9P2W9	335 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	MAPK8IP1	Q9UQF2	711 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	SPDYE3	A6NKU9	549 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	EIF2B2	P49770	351 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	ITGAD	Q13349	1161 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	TMC4	Q7Z404	712 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	ABTB2	Q8N961	1025 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	TNIP2	Q8NFZ5	429 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	DNAJC7	Q99615	494 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	ZHX2	Q9Y6X8	837 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288		E9PCH4	1651 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	ECE1	P42892	770 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	CHN2	P52757	468 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	DSG1	Q02413	1049 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	KYNU	Q16719	465 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	PACS1	Q6VY07	963 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	LDHAL6A	Q6ZMR3	332 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	KRT25	Q7Z3Z0	450 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	PDIK1L	Q8N165	341 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	USP38	Q8NB14	1042 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	MDM1	Q8TC05	714 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	TRPC5	Q9UL62	973 aa	Predicted RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	SNX24	Q9Y343	169 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	CHN1	P15882	459 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	KIF11	P52732	1056 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	RABGAP1L	Q5R372	815 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	MAGEE1	Q9HCI5	957 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	KRT14	P02533	472 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	RPL22	P35268	128 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	MCL1	Q07820	350 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	KIAA1755	Q5JYT7	1200 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	CD2AP	Q9Y5K6	639 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	CXCR5	P32302	372 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	AOC3	Q16853	763 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.53	□□□□□ -1.68	3e-12	■■■■■ 57
MACF1-231	ENST00000564288	CDC42BPB	Q9Y5S2	1711 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	SAC3D1	A6NKF1	404 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	NOP56	O00567	594 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	ADGRB3	O60242	1522 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	XRCC5	P13010	732 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	KIAA2013	Q8IYS2	634 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	CAAP1	Q9H8G2	361 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	MRPL44	Q9H9J2	332 aa	Known RBP	4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	TRIM43B	A6NCK2	446 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	RASA4B	C9J798	803 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	RASA4	O43374	803 aa		4.53	□□□□□ -1.68
MACF1-231	ENST00000564288	BUB1	O43683	1085 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms