RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 MAEAQ7L5Y9 396 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 TRIML1Q8N9V2 468 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 TCP11Q8WWU5 503 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 HERVK_113Q902F9 699 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 KIFAP3Q92845 792 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 VWCEQ96DN2 955 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 DRC1Q96MC2 740 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 REEP2Q9BRK0 252 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 DHX33Q9H6R0 707 aaKnown RBP18.75■□□□□ 0.59
CMTM3-208ENST00000564247 HIP1RO75146 1068 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 SMIM10L2AP0DMW4 78 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 SMIM10L2BP0DMW5 78 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 KLRC1P26715 233 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 HOXC8P31273 242 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
CMTM3-208ENST00000564247 PSMD2Q13200 908 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 PTK7Q13308 1070 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 EMC2Q15006 297 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 GRIK4Q16099 956 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 KMT5BQ4FZB7 885 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 HERC4Q5GLZ8 1057 aaPredicted RBP18.74■□□□□ 0.59
CMTM3-208ENST00000564247 DEFB123Q8N688 67 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 DHX38Q92620 1227 aaKnown RBP18.74■□□□□ 0.59
CMTM3-208ENST00000564247 PARVGQ9HBI0 331 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 MAN1B1Q9UKM7 699 aa18.74■□□□□ 0.59
CMTM3-208ENST00000564247 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.73■□□□□ 0.59
CMTM3-208ENST00000564247 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.73■□□□□ 0.59
CMTM3-208ENST00000564247 C17orf102A2RUQ5 167 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 BIN1O00499 593 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 KLRC4O43908 158 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 CCDC192P0DO97 292 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 TMOD1P28289 359 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 HIC1Q14526 733 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 IER5Q5VY09 327 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 MYCT1Q8N699 235 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 CEP89Q96ST8 783 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 MTIF3Q9H2K0 278 aaKnown RBP18.73■□□□□ 0.59
CMTM3-208ENST00000564247 SUGCTQ9HAC7 445 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 C17orf75Q9HAS0 396 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 SETD4Q9NVD3 440 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 LARSQ9P2J5 1176 aaKnown RBP18.73■□□□□ 0.59
CMTM3-208ENST00000564247 SEL1LQ9UBV2 794 aa18.73■□□□□ 0.59
CMTM3-208ENST00000564247 ARID2Q68CP9 1835 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 MYH11P35749 1972 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 SFI1A8K8P3 1242 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 ZBTB42B2RXF5 422 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 RHOBTB3O94955 611 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 SELPP16109 830 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 NLRP12P59046 1061 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 ZNF200P98182 395 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-208ENST00000564247 TRIM71Q2Q1W2 868 aaKnown RBP18.72■□□□□ 0.59
CMTM3-208ENST00000564247 ISM2Q6H9L7 571 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 EFCAB12Q6NXP0 572 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 MTHFD1LQ6UB35 978 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 Q7L0L9 218 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 SERINC5Q86VE9 423 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 METTL13Q8N6R0 699 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 TRAPPC12Q8WVT3 735 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 IFT74Q96LB3 600 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 POLD4Q9HCU8 107 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 ANO10Q9NW15 660 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 COL6A3P12111 3177 aa18.72■□□□□ 0.59
CMTM3-208ENST00000564247 TET1Q8NFU7 2136 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 FRMD3A2A2Y4 597 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 RSPH10B2B2RC85 870 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 PARNO95453 639 aaKnown RBP18.71■□□□□ 0.59
CMTM3-208ENST00000564247 RSPH10BP0C881 870 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 CKBP12277 381 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 SMTNP53814 917 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 COASYQ13057 564 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 MORC3Q14149 939 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 STX1AQ16623 288 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 ZNF658Q5TYW1 1059 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-208ENST00000564247 OTOP2Q7RTS6 562 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 DEFB128Q7Z7B8 93 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 TMEM143Q96AN5 459 aa18.71■□□□□ 0.59
CMTM3-208ENST00000564247 CXXC1Q9P0U4 656 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-208ENST00000564247 IGKV6-21A0A0C4DH24 114 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 ASAP2O43150 1006 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 C22orf31O95567 290 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 PLS3P13797 630 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 ZNF131P52739 623 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 ZNF445P59923 1031 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 TYRO3Q06418 890 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 PPP2R5AQ15172 486 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 FAM26FQ5R3K3 315 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 ODR4Q5SWX8 454 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 ZNF697Q5TEC3 545 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 LRSAM1Q6UWE0 723 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 LRRC8DQ7L1W4 858 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 SLC17A8Q8NDX2 589 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 LMBR1Q8WVP7 490 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 EVPLQ92817 2033 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 WNT8BQ93098 351 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 POLR3FQ9H1D9 316 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-208ENST00000564247 GPRC5CQ9NQ84 441 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 XPNPEP1Q9NQW7 623 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 MTMR10Q9NXD2 777 aa18.7■□□□□ 0.58
CMTM3-208ENST00000564247 SUCLA2Q9P2R7 463 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-208ENST00000564247 DACH1Q9UI36 760 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms