RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 USP54Q70EL1 1684 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 PVALEFA0A1B0GWK0 134 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 COQ9O75208 318 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 UBTFL6P0CB48 400 aaPredicted RBP13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 SKIP12755 728 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 KHDC1Q4VXA5 237 aaKnown RBP13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 OPTNQ96CV9 577 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 IFT43Q96FT9 208 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 FGFBP2Q9BYJ0 223 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 TMEM165Q9HC07 324 aa13.3□□□□□ -0.28
SCAMP2-204ENST00000563829 FAM187AA6NFU0 413 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 IRS4O14654 1257 aaPredicted RBP13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 ZCCHC18P0CG32 403 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 UCHL3P15374 230 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 GALCP54803 685 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 NCAPG2Q86XI2 1143 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 TRIM59Q8IWR1 403 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 ENDOVQ8N8Q3 282 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 MARCH10Q8NA82 808 aaPredicted RBP13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 RBM46Q8TBY0 533 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 DTX3LQ8TDB6 740 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 ORAI2Q96SN7 254 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 PLA2G12BQ9BX93 195 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 PREBQ9HCU5 417 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 STOML1Q9UBI4 398 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 CHKBQ9Y259 395 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 MEGF6O75095 1541 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 TPP2P29144 1249 aaPredicted RBP13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 VHLP40337 213 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 CACNB1Q02641 598 aaPredicted RBP13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 MTFR1Q15390 333 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 TNFAIP8L3Q5GJ75 292 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 VPS36Q86VN1 386 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 PROM2Q8N271 834 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 SLC35G2Q8TBE7 412 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 NT5C3AQ9H0P0 336 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 DCLRE1BQ9H816 532 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 SEC63Q9UGP8 760 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 MYH3P11055 1940 aa13.29□□□□□ -0.28
SCAMP2-204ENST00000563829 M0R2N6 131 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 GSTA2P09210 222 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 DHX34Q14147 1143 aaKnown RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 RCN1Q15293 331 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 LLGL1Q15334 1064 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 RFWD3Q6PCD5 774 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 SRRM1Q8IYB3 904 aaKnown RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 SH3RF3Q8TEJ3 882 aaPredicted RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 DNAAF2Q9NVR5 837 aaKnown RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 GALNT8Q9NY28 637 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 ADAMTS7Q9UKP4 1686 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 POTEMA6NI47 508 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 ANKRD63C9JTQ0 380 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 ZSCAN9O15535 394 aaPredicted RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 RARGP13631 454 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 ETS2P15036 469 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 POLGP54098 1239 aaPredicted RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 MCL1Q07820 350 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 CMPK2Q5EBM0 449 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 GJB7Q6PEY0 223 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 KIF6Q6ZMV9 814 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 SLC7A6OSQ96CW6 309 aaPredicted RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 CPVLQ9H3G5 476 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 ZHX3Q9H4I2 956 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 DMAP1Q9NPF5 467 aaPredicted RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 NKIRAS1Q9NYS0 192 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 TRMT112Q9UI30 125 aaKnown RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 DDX3YO15523 660 aaKnown RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 ATP5HO75947 161 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 IMPDH2P12268 514 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 FGFR2P21802 821 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 DNAJC3Q13217 504 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 MFSD5Q6N075 450 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 KCNK18Q7Z418 384 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 ALG3Q92685 438 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 DTNBP1Q96EV8 351 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 CDC42EP4Q9H3Q1 356 aaKnown RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 BZW2Q9Y6E2 419 aaKnown RBP13.28□□□□□ -0.28
SCAMP2-204ENST00000563829 hCG_2014768A0A024R1R8 64 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 DDX3XO00571 662 aaKnown RBP eCLIP13.27□□□□□ -0.282e-14■■■■□ 24.7
SCAMP2-204ENST00000563829 TJP3O95049 919 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 FOXN2P32314 431 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 MYBPC3Q14896 1274 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 EXOC3L4Q17RC7 722 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 TCERG1LQ5VWI1 586 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 CCDC105Q8IYK2 499 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 PNMA5Q96PV4 448 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 MMADHCQ9H3L0 296 aaPredicted RBP13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 SEPT11Q9NVA2 429 aaKnown RBP13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 USH1CQ9Y6N9 552 aa13.27□□□□□ -0.28
SCAMP2-204ENST00000563829 PITPNM2Q9BZ72 1349 aa13.27□□□□□ -0.29
SCAMP2-204ENST00000563829 GFPT2O94808 682 aa13.27□□□□□ -0.29
SCAMP2-204ENST00000563829 SETSIPP0DME0 302 aa13.27□□□□□ -0.29
SCAMP2-204ENST00000563829 TAC1P20366 129 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms