RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 USP15Q9Y4E8 981 aaPredicted RBP13.73□□□□□ -0.21
CCDC187-201ENST00000563590 CNTNAP4Q9C0A0 1308 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 PPIP5K2O43314 1243 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 CCND1P24385 295 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 PRR5LQ6MZQ0 368 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 HOMER2Q9NSB8 354 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 MAD2L2Q9UI95 211 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 TMEM59LQ9UK28 342 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 PAPPAQ13219 1627 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 NPHP3-ACAD11A0A0J9YXS1 232 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 CETN3O15182 167 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 LDHCP07864 332 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 ERMARDQ5T6L9 678 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 GJB7Q6PEY0 223 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 STMN4Q9H169 189 aaPredicted RBP13.73□□□□□ -0.21
CCDC187-201ENST00000563590 GGA1Q9UJY5 639 aa13.73□□□□□ -0.21
CCDC187-201ENST00000563590 LRP5O75197 1615 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 HOXA13P31271 388 aaPredicted RBP13.72□□□□□ -0.21
CCDC187-201ENST00000563590 GJC1P36383 396 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 COPS2P61201 443 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 LRRC63Q05C16 580 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 RASIP1Q5U651 963 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 DEFB132Q7Z7B7 95 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 CTTNBP2NLQ9P2B4 639 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 ANKRD62A6NC57 917 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 NR2F2P24468 414 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 KCNJ1P48048 391 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 PAPOLAP51003 745 aaKnown RBP13.72□□□□□ -0.21
CCDC187-201ENST00000563590 COBLL1Q53SF7 1204 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 AADACL2Q6P093 401 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 ZC3H18Q86VM9 953 aaKnown RBP13.72□□□□□ -0.21
CCDC187-201ENST00000563590 SRRM1Q8IYB3 904 aaKnown RBP13.72□□□□□ -0.21
CCDC187-201ENST00000563590 OSGEPQ9NPF4 335 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 NR2E1Q9Y466 385 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 RTN2O75298 545 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 LRRN2O75325 713 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
CCDC187-201ENST00000563590 STAT3P40763 770 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 EIF3BP55884 814 aaKnown RBP13.72□□□□□ -0.21
CCDC187-201ENST00000563590 GRM4Q14833 912 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 MIS18BP1Q6P0N0 1132 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 NEK8Q86SG6 692 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 DAGLBQ8NCG7 672 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 DTX3LQ8TDB6 740 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 PNMA5Q96PV4 448 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 EDEM3Q9BZQ6 932 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 STK32BQ9NY57 414 aa13.72□□□□□ -0.21
CCDC187-201ENST00000563590 ARAP2Q8WZ64 1704 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 C5orf60A6NFR6 353 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 CLIC2O15247 247 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 GYS1P13807 737 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 CDK8P49336 464 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 USP11P51784 963 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 KCNH2Q12809 1159 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 EXOC3L4Q17RC7 722 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.21
CCDC187-201ENST00000563590 TLDC1Q6P9B6 456 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 C3orf20Q8ND61 904 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 SCFD2Q8WU76 684 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 NUCKS1Q9H1E3 243 aaKnown RBP13.71□□□□□ -0.21
CCDC187-201ENST00000563590 METTL5Q9NRN9 209 aaKnown RBP13.71□□□□□ -0.21
CCDC187-201ENST00000563590 ABCB11O95342 1321 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 TMEM120BA0PK00 339 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 CCDC188H7C350 402 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 ATP4AP20648 1035 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 PABPC4Q13310 644 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCDC187-201ENST00000563590 HP1BP3Q5SSJ5 553 aaPredicted RBP13.71□□□□□ -0.21
CCDC187-201ENST00000563590 KCNK18Q7Z418 384 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 SPATA21Q7Z572 469 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 GLYCTKQ8IVS8 523 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 NLGN1Q8N2Q7 840 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 CEP120Q8N960 986 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 TGS1Q96RS0 853 aaKnown RBP13.71□□□□□ -0.21
CCDC187-201ENST00000563590 NUDT12Q9BQG2 462 aa13.71□□□□□ -0.21
CCDC187-201ENST00000563590 NHSL1Q5SYE7 1610 aa13.71□□□□□ -0.22
CCDC187-201ENST00000563590 GHRP10912 638 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 NCALDP61601 193 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 ZBTB16Q05516 673 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 ADCY2Q08462 1091 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 MESDQ14696 234 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 SHROOM1Q2M3G4 852 aaPredicted RBP13.7□□□□□ -0.22
CCDC187-201ENST00000563590 PRR16Q569H4 304 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 CCDC174Q6PII3 467 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 SERPINA10Q9UK55 444 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 AHDC1Q5TGY3 1603 aaPredicted RBP13.7□□□□□ -0.22
CCDC187-201ENST00000563590 PVALEFA0A1B0GWK0 134 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 CLRN2A0PK11 232 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 WDR91A4D1P6 747 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 DPPA5A6NC42 116 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 IRF6O14896 467 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
CCDC187-201ENST00000563590 LACTB2Q53H82 288 aaPredicted RBP13.7□□□□□ -0.22
CCDC187-201ENST00000563590 CPXCR1Q8N123 301 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 ARMCX3Q9UH62 379 aaPredicted RBP13.7□□□□□ -0.22
CCDC187-201ENST00000563590 HAO1Q9UJM8 370 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 CFBP00751 764 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms