RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CCDC136Q96JN2 1154 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 ZNF668Q96K58 619 aaPredicted RBP21.05■□□□□ 0.96
NME3-204ENST00000563498 NIFKQ9BYG3 293 aaKnown RBP21.05■□□□□ 0.96
NME3-204ENST00000563498 GCOM2Q9BZD3 368 aaPredicted RBP21.05■□□□□ 0.96
NME3-204ENST00000563498 POMKQ9H5K3 350 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 CDC45O75419 566 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 SP100P23497 879 aaPredicted RBP21.04■□□□□ 0.96
NME3-204ENST00000563498 MTHFRP42898 656 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 GIT2Q14161 759 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 LRCH2Q5VUJ6 765 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 PHKBQ93100 1093 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 TEKT3Q9BXF9 490 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 AGXT2Q9BYV1 514 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 SH3GLB2Q9NR46 395 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 TSHZ2Q9NRE2 1034 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 DZANK1Q9NVP4 752 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 IRAK3Q9Y616 596 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 USP34Q70CQ2 3546 aa21.04■□□□□ 0.96
NME3-204ENST00000563498 C2CD4DB7Z1M9 353 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 CHMP2AO43633 222 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 CXCL14O95715 111 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 SKIP12755 728 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 CPA1P15085 419 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 FGFR4P22455 802 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 POLGP54098 1239 aaPredicted RBP21.03■□□□□ 0.96
NME3-204ENST00000563498 UNC45AQ9H3U1 944 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 CDH22Q9UJ99 828 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 CACNA1HO95180 2353 aa21.03■□□□□ 0.96
NME3-204ENST00000563498 IGKV6-21A0A0C4DH24 114 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 PSMD10O75832 226 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 IFNAR1P17181 557 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 SFPQP23246 707 aaKnown RBP eCLIP21.02■□□□□ 0.96
NME3-204ENST00000563498 PHKA2P46019 1235 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 DNM2P50570 870 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 DRP2Q13474 957 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 Q4G0T1 1027 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 XKR3Q5GH77 459 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 BLOC1S2Q6QNY1 142 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 DDX53Q86TM3 631 aaKnown RBP21.02■□□□□ 0.96
NME3-204ENST00000563498 VPS52Q8N1B4 723 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 ATOH1Q92858 354 aaPredicted RBP21.02■□□□□ 0.96
NME3-204ENST00000563498 JAKMIP1Q96N16 626 aaKnown RBP21.02■□□□□ 0.96
NME3-204ENST00000563498 CEP89Q96ST8 783 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 C22orf23Q9BZE7 217 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 INO80BQ9C086 356 aaPredicted RBP21.02■□□□□ 0.96
NME3-204ENST00000563498 ZBP1Q9H171 429 aa21.02■□□□□ 0.96
NME3-204ENST00000563498 NT5C1B-RDH14C9J2C7 533 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 GFRA3O60609 400 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 CSDE1O75534 798 aaKnown RBP21.01■□□□□ 0.95
NME3-204ENST00000563498 BRD1O95696 1058 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 PDGFBP01127 241 aaPredicted RBP21.01■□□□□ 0.95
NME3-204ENST00000563498 CTSAP10619 480 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 KIAA1841Q6NSI8 718 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 B3GNT9Q6UX72 402 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 ZNF410Q86VK4 478 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 ZDHHC14Q8IZN3 488 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 SLC26A6Q9BXS9 759 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 FAM86C1Q9NVL1 165 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 VPS54Q9P1Q0 977 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 SEPT9Q9UHD8 586 aaPredicted RBP21.01■□□□□ 0.95
NME3-204ENST00000563498 USTQ9Y2C2 406 aa21.01■□□□□ 0.95
NME3-204ENST00000563498 CYP3A7-CYP3A51PA0A087WV96 503 aa21■□□□□ 0.95
NME3-204ENST00000563498 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21■□□□□ 0.95
NME3-204ENST00000563498 GALR2O43603 387 aaPredicted RBP21■□□□□ 0.95
NME3-204ENST00000563498 ZC3H11AO75152 810 aaKnown RBP eCLIP21■□□□□ 0.955e-7■□□□□ 8.5
NME3-204ENST00000563498 STBD1O95210 358 aa21■□□□□ 0.95
NME3-204ENST00000563498 CYP3A7P24462 503 aa21■□□□□ 0.95
NME3-204ENST00000563498 HSPA4P34932 840 aa21■□□□□ 0.95
NME3-204ENST00000563498 CA8P35219 290 aa21■□□□□ 0.95
NME3-204ENST00000563498 RAB27AP51159 221 aa21■□□□□ 0.95
NME3-204ENST00000563498 EVCP57679 992 aa21■□□□□ 0.95
NME3-204ENST00000563498 MTERF2Q49AM1 385 aa21■□□□□ 0.95
NME3-204ENST00000563498 ATAT1Q5SQI0 421 aa21■□□□□ 0.95
NME3-204ENST00000563498 TWF2Q6IBS0 349 aaKnown RBP21■□□□□ 0.95
NME3-204ENST00000563498 GLB1LQ6UWU2 654 aa21■□□□□ 0.95
NME3-204ENST00000563498 MIER3Q7Z3K6 550 aa21■□□□□ 0.95
NME3-204ENST00000563498 TMEM173Q86WV6 379 aaPredicted RBP21■□□□□ 0.95
NME3-204ENST00000563498 TMEM87AQ8NBN3 555 aa21■□□□□ 0.95
NME3-204ENST00000563498 TBCKQ8TEA7 893 aa21■□□□□ 0.95
NME3-204ENST00000563498 IGSF21Q96ID5 467 aa21■□□□□ 0.95
NME3-204ENST00000563498 SNX14Q9Y5W7 946 aa21■□□□□ 0.95
NME3-204ENST00000563498 A0A087WZ62 844 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 PROB1E7EW31 1015 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 ZNF623O75123 536 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 RPS6KB1P23443 525 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 RARS2Q5T160 578 aaKnown RBP20.99■□□□□ 0.95
NME3-204ENST00000563498 CENPQQ7L2Z9 268 aaPredicted RBP20.99■□□□□ 0.95
NME3-204ENST00000563498 PLCD3Q8N3E9 789 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 TDRD5Q8NAT2 981 aaKnown RBP20.99■□□□□ 0.95
NME3-204ENST00000563498 SLC22A17Q8WUG5 538 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 FDXACB1Q9BRP7 624 aaPredicted RBP20.99■□□□□ 0.95
NME3-204ENST00000563498 FAM105AQ9NUU6 356 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 TBC1D13Q9NVG8 400 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 STK39Q9UEW8 545 aa20.99■□□□□ 0.95
NME3-204ENST00000563498 MAFO75444 373 aaPredicted RBP20.98■□□□□ 0.95
NME3-204ENST00000563498 GALTP07902 379 aa20.98■□□□□ 0.95
NME3-204ENST00000563498 NLRP5P59047 1200 aa20.98■□□□□ 0.95
NME3-204ENST00000563498 NOMO2Q5JPE7 1267 aa20.98■□□□□ 0.95
NME3-204ENST00000563498 PPFIBP1Q86W92 1011 aa20.98■□□□□ 0.95
NME3-204ENST00000563498 SKAP1Q86WV1 359 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms