RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 HGSNATQ68CP4 663 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 ZSWIM2Q8NEG5 633 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 KIFAP3Q92845 792 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 TBX20Q9UMR3 447 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 DOCK5Q9H7D0 1870 aa10.29□□□□□ -0.76
LINC00838-201ENST00000562956 UNCXA6NJT0 531 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 URI1O94763 535 aaPredicted RBP10.28□□□□□ -0.76
LINC00838-201ENST00000562956 GGPS1O95749 300 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 OATP04181 439 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 TRIM49P0CI25 452 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 TRIM49CP0CI26 452 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 TGFB3P10600 412 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 SMTNP53814 917 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 KRT83P78385 493 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 NCBP1Q09161 790 aaKnown RBP10.28□□□□□ -0.76
LINC00838-201ENST00000562956 NEDD9Q14511 834 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 ZNF569Q5MCW4 686 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 KLHDC7AQ5VTJ3 777 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 BRI3BPQ8WY22 251 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 NTPCRQ9BSD7 190 aaKnown RBP10.28□□□□□ -0.76
LINC00838-201ENST00000562956 ATP6V0A4Q9HBG4 840 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 PLCB1Q9NQ66 1216 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 KMT5AQ9NQR1 393 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 GCNT4Q9P109 453 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 PNMA3Q9UL41 463 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 ADGRA3Q8IWK6 1321 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 CCL15-CCL14A0A0B4J2E2 113 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 DENND3A2RUS2 1198 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 CETPP11597 493 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 UCHL3P15374 230 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 MYBPC2Q14324 1141 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 CCL15Q16663 113 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 CBWD6Q4V339 395 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 CBWD3Q5JTY5 395 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 CBWD5Q5RIA9 395 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 SFMBT2Q5VUG0 894 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 GBP6Q6ZN66 633 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 FBXO16Q8IX29 292 aaPredicted RBP10.28□□□□□ -0.76
LINC00838-201ENST00000562956 ANKRD13CQ8N6S4 541 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 LRRN4CLQ8ND94 238 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 MCPH1Q8NEM0 835 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 TMEM174Q8WUU8 243 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 LACRTQ9GZZ8 138 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 GBA2Q9HCG7 927 aaPredicted RBP10.28□□□□□ -0.76
LINC00838-201ENST00000562956 SIX2Q9NPC8 291 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 HSPBP1Q9NZL4 362 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 DDX41Q9UJV9 622 aaKnown RBP10.28□□□□□ -0.76
LINC00838-201ENST00000562956 GUCA1BQ9UMX6 200 aa10.28□□□□□ -0.76
LINC00838-201ENST00000562956 ANKRD63C9JTQ0 380 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 ADSSP30520 456 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 TCF7P36402 384 aaPredicted RBP10.27□□□□□ -0.76
LINC00838-201ENST00000562956 FMO5P49326 533 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 GTF2A2P52657 109 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 KIF11P52732 1056 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 DLG4P78352 724 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 BFSP1Q12934 665 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 RAPGEF1Q13905 1077 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 TMEM63BQ5T3F8 832 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 METTL7BQ6UX53 244 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 C12orf56Q8IXR9 622 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 SLC17A8Q8NDX2 589 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 GPRC5AQ8NFJ5 357 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 SPIRE2Q8WWL2 714 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 SYN2Q92777 582 aaPredicted RBP10.27□□□□□ -0.76
LINC00838-201ENST00000562956 POLR3FQ9H1D9 316 aaPredicted RBP10.27□□□□□ -0.76
LINC00838-201ENST00000562956 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.76
LINC00838-201ENST00000562956 C17orf75Q9HAS0 396 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 AJAP1Q9UKB5 411 aaPredicted RBP10.27□□□□□ -0.76
LINC00838-201ENST00000562956 FHOD1Q9Y613 1164 aa10.27□□□□□ -0.76
LINC00838-201ENST00000562956 GTPBP10A4D1E9 387 aaKnown RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 CELF2O95319 508 aaKnown RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 SLU7O95391 586 aaKnown RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 POLGP54098 1239 aaPredicted RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 ARID5AQ03989 594 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 EMC2Q15006 297 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 PPP2R5AQ15172 486 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 ASTE1Q2TB18 679 aaPredicted RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 HSDL1Q3SXM5 330 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 KIAA1328Q86T90 577 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 MAP4K3Q8IVH8 894 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 SLC35F6Q8N357 371 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 SHCBP1Q8NEM2 672 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 ANKRD7Q92527 254 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 TMEM143Q96AN5 459 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 CEP89Q96ST8 783 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 MPHOSPH6Q99547 160 aaKnown RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 DEF6Q9H4E7 631 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 HAUS4Q9H6D7 363 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 MLXIPQ9HAP2 919 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 ST7Q9NRC1 585 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 DUSP10Q9Y6W6 482 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 IPO7O95373 1038 aaKnown RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 STAT5BP51692 787 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 RTP1P59025 263 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 CCDC122Q5T0U0 273 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 GJB7Q6PEY0 223 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 XXYLT1Q8NBI6 393 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 SEPT1Q8WYJ6 367 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 JAKMIP2Q96AA8 810 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms