RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 VSIG10L2P0DP72 767 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 RANGAP1P46060 587 aaPredicted RBP4.8□□□□□ -1.64
DENND4A-205ENST00000562540 ANTXR2P58335 489 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 CC2D1AQ6P1N0 951 aaPredicted RBP4.8□□□□□ -1.64
DENND4A-205ENST00000562540 KCNV1Q6PIU1 500 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 LRRC55Q6ZSA7 311 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 HTR3DQ70Z44 454 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 PLA2G15Q8NCC3 412 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 GSTCDQ8NEC7 633 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 NKD2Q969F2 451 aaPredicted RBP4.8□□□□□ -1.64
DENND4A-205ENST00000562540 ZNF764Q96H86 408 aaPredicted RBP4.8□□□□□ -1.64
DENND4A-205ENST00000562540 CCDC113Q9H0I3 377 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 FZD1Q9UP38 647 aa4.8□□□□□ -1.64
DENND4A-205ENST00000562540 PPFIA4O75335 1185 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 ITGB1P05556 798 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 FNTBP49356 437 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 LONRF2Q1L5Z9 754 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 TMEM177Q53S58 311 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 C1QL3Q5VWW1 255 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 SLFN12LQ6IEE8 588 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 CLEC14AQ86T13 490 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 MDGA1Q8NFP4 955 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 SLC7A14Q8TBB6 771 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 DYDC2Q96IM9 177 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 ZNF512Q96ME7 567 aaPredicted RBP4.79□□□□□ -1.64
DENND4A-205ENST00000562540 WDR92Q96MX6 357 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 BOCQ9BWV1 1114 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 POLR3BQ9NW08 1133 aaPredicted RBP4.79□□□□□ -1.64
DENND4A-205ENST00000562540 KCMF1Q9P0J7 381 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 SFMBT1Q9UHJ3 866 aa4.79□□□□□ -1.64
DENND4A-205ENST00000562540 KDM2BQ8NHM5 1336 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 GRID2IPA4D2P6 1211 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 KRT37O76014 449 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 NPTXRO95502 500 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 JUNP05412 331 aaKnown RBP4.78□□□□□ -1.64
DENND4A-205ENST00000562540 PRIMA1Q86XR5 153 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 IGSF22Q8N9C0 903 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 CPT1CQ8TCG5 803 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 THAP3Q8WTV1 239 aaPredicted RBP4.78□□□□□ -1.64
DENND4A-205ENST00000562540 MAML3Q96JK9 1138 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 DNAI1Q9UI46 699 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 SORCS3Q9UPU3 1222 aa4.78□□□□□ -1.64
DENND4A-205ENST00000562540 UBA6A0AVT1 1052 aaPredicted RBP4.77□□□□□ -1.65
DENND4A-205ENST00000562540 ZAR1LA6NP61 321 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 GRXCR1A8MXD5 290 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 MASP2O00187 686 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 DAPK3O43293 454 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 ZBTB48P10074 688 aaPredicted RBP4.77□□□□□ -1.65
DENND4A-205ENST00000562540 GNAT2P19087 354 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 NR4A1P22736 598 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 KIF11P52732 1056 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 NPEPPSP55786 919 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 TIGD2Q4W5G0 525 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 TRIM61Q5EBN2 209 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 DCAF17Q5H9S7 520 aaPredicted RBP4.77□□□□□ -1.65
DENND4A-205ENST00000562540 ZC3H12BQ5HYM0 836 aaKnown RBP4.77□□□□□ -1.65
DENND4A-205ENST00000562540 HECTD2Q5U5R9 776 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 PRAMEF9Q5VWM5 478 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 BHLHA9Q7RTU4 235 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 NTN5Q8WTR8 489 aaPredicted RBP4.77□□□□□ -1.65
DENND4A-205ENST00000562540 ST8SIA2Q92186 375 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 SCLYQ96I15 445 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 FAM193BQ96PV7 902 aaPredicted RBP4.77□□□□□ -1.65
DENND4A-205ENST00000562540 TANGO6Q9C0B7 1094 aa4.77□□□□□ -1.65
DENND4A-205ENST00000562540 C14orf93Q9H972 538 aaKnown RBP4.77□□□□□ -1.65
DENND4A-205ENST00000562540 PPP1R1BQ9UD71 204 aaPredicted RBP4.77□□□□□ -1.65
DENND4A-205ENST00000562540 TCRBV16S1A1N1A0A5B0 115 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 B3GALT2O43825 422 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 SPIDRQ14159 915 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 SF3A1Q15459 793 aaKnown RBP4.76□□□□□ -1.65
DENND4A-205ENST00000562540 PLEKHG4Q58EX7 1191 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 TTC38Q5R3I4 469 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 STRIP1Q5VSL9 837 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 NAIF1Q69YI7 327 aaPredicted RBP4.76□□□□□ -1.65
DENND4A-205ENST00000562540 ABHD17CQ6PCB6 329 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 OTOP1Q7RTM1 612 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 BRAPQ7Z569 592 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 BMP8AQ7Z5Y6 402 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 CMTM4Q8IZR5 234 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 PCIF1Q9H4Z3 704 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 HS3ST4Q9Y661 456 aa4.76□□□□□ -1.65
DENND4A-205ENST00000562540 RECQL4O94761 1208 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 SCAF4O95104 1147 aaKnown RBP4.75□□□□□ -1.65
DENND4A-205ENST00000562540 HNRNPLP14866 589 aaKnown RBP eCLIP4.75□□□□□ -1.65
DENND4A-205ENST00000562540 GYPEP15421 78 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 HK1P19367 917 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 C21orf58P58505 322 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 ARHGAP44Q17R89 818 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 NBPF6Q5VWK0 638 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 ZKSCAN2Q63HK3 967 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 SYCE2Q6PIF2 218 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 APBB1IPQ7Z5R6 666 aaPredicted RBP4.75□□□□□ -1.65
DENND4A-205ENST00000562540 ADGRG3Q86Y34 549 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 BEND2Q8NDZ0 799 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 RPGRQ92834 1020 aaKnown RBP4.75□□□□□ -1.65
DENND4A-205ENST00000562540 NBPF4Q96M43 638 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 TUBGCP5Q96RT8 1024 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 CYP4F11Q9HBI6 524 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 ACSS2Q9NR19 701 aa4.75□□□□□ -1.65
DENND4A-205ENST00000562540 ADARB2Q9NS39 739 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms