RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 A0A087WZ62 844 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SLC37A4O43826 429 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TECP42680 631 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 KRT17Q04695 432 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 NONOQ15233 471 aaKnown RBP eCLIP18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 INF2Q27J81 1249 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ANKRD54Q6NXT1 300 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 LLGL2Q6P1M3 1020 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SYCE2Q6PIF2 218 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 ANO5Q75V66 913 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 SLC39A11Q8N1S5 342 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 FDXACB1Q9BRP7 624 aaPredicted RBP18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 GCOM2Q9BZD3 368 aaPredicted RBP18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TM6SF1Q9BZW5 370 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 DACT1Q9NYF0 836 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 KCNJ14Q9UNX9 436 aa18.77■□□□□ 0.6
VPS9D1-AS1-201ENST00000562298 TECTAO75443 2155 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 EML1O00423 815 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 MAFO75444 373 aaPredicted RBP18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 SRGAP2BP0DMP2 458 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PHKA2P46019 1235 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 NHLH1Q02575 133 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PLA2G4FQ68DD2 849 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 GALNT17Q6IS24 598 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 TRIM67Q6ZTA4 783 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 TMC7Q7Z402 723 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 FAM177A1Q8N128 213 aaPredicted RBP18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 MFSD14AQ96MC6 490 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 TRAIPQ9BWF2 469 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 APOL5Q9BWW9 433 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 KCNH6Q9H252 994 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CHST12Q9NRB3 414 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 SUCLA2Q9P2R7 463 aaPredicted RBP18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 DDX25Q9UHL0 483 aaKnown RBP18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 VAV3Q9UKW4 847 aa18.76■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 ZNF318Q5VUA4 2279 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 USP34Q70CQ2 3546 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 DDX11L8A8MPP1 907 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 NT5C1B-RDH14C9J2C7 533 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 DNM2P50570 870 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 BCAR1P56945 870 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 ZXDAP98168 799 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CDC42EP1Q00587 391 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 KRT25Q7Z3Z0 450 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 ALYREFQ86V81 257 aaKnown RBP18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 ZNF410Q86VK4 478 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 RHPN2Q8IUC4 686 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 KSR1Q8IVT5 923 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 LPPQ93052 612 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PHF20Q9BVI0 1012 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 MRPL9Q9BYD2 267 aaKnown RBP18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CDH22Q9UJ99 828 aa18.75■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 TMEM221A6NGB7 291 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 C2orf71A6NGG8 1288 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 MEIS3P2A8K0S8 358 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 M0R296 226 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 DTNBO60941 627 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 SFPQP23246 707 aaKnown RBP eCLIP18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PSMC5P62195 406 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 SCRN1Q12765 414 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PPP2R5CQ13362 524 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 SMC1AQ14683 1233 aaKnown RBP18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 LETM2Q2VYF4 491 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 LONRF3Q496Y0 759 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CPLX2Q6PUV4 134 aaKnown RBP18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 BMP8AQ7Z5Y6 402 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 TMEM173Q86WV6 379 aaPredicted RBP18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 MRPL43Q8N983 215 aaKnown RBP18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 KCNMB3Q9NPA1 279 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 GJB4Q9NTQ9 266 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 WRAP73Q9P2S5 460 aaPredicted RBP18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PIN4Q9Y237 131 aaKnown RBP18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 HCFC2Q9Y5Z7 792 aa18.74■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 NPEPPSP55786 919 aa18.73■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 TWF2Q6IBS0 349 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 ZNF579Q8NAF0 562 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 NLRP4Q96MN2 994 aa18.73■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 IFT122Q9HBG6 1241 aa18.73■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CYP26B1Q9NR63 512 aa18.73■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 FAM105AQ9NUU6 356 aa18.73■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CLASP2O75122 1294 aaKnown RBP18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 HOXB8P17481 243 aaPredicted RBP18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 QARSP47897 775 aaKnown RBP18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 ALDH7A1P49419 539 aaKnown RBP18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 NEK8Q86SG6 692 aa18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 OXER1Q8TDS5 423 aa18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CASP10Q92851 521 aa18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PBXIP1Q96AQ6 731 aa18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 INO80BQ9C086 356 aaPredicted RBP18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 TBC1D13Q9NVG8 400 aa18.72■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CCDC194A0A1B0GVG4 234 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 SP100P23497 879 aaPredicted RBP18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 IER5LQ5T953 404 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 PPP4R3AQ6IN85 833 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 CATSPER4Q7RTX7 472 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 BCL7CQ8WUZ0 217 aaPredicted RBP18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 AUTS2Q8WXX7 1259 aa18.71■□□□□ 0.59
VPS9D1-AS1-201ENST00000562298 RSPH1Q8WYR4 309 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms