RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CNNM4Q6P4Q7 775 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 FOXD4L3Q6VB84 417 aaPredicted RBP14.9□□□□□ -0.02
CDH1-204ENST00000562118 SRGAP1Q7Z6B7 1085 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 RHPN2Q8IUC4 686 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 KSR1Q8IVT5 923 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 PHOSPHO2Q8TCD6 241 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 LARP4BQ92615 738 aaKnown RBP14.9□□□□□ -0.02
CDH1-204ENST00000562118 KIFAP3Q92845 792 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 TRAIPQ9BWF2 469 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 FTHL17Q9BXU8 183 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 POLR3FQ9H1D9 316 aaPredicted RBP14.9□□□□□ -0.02
CDH1-204ENST00000562118 TSPYL2Q9H2G4 693 aaPredicted RBP14.9□□□□□ -0.02
CDH1-204ENST00000562118 C17orf75Q9HAS0 396 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 GPRC5CQ9NQ84 441 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 CHMP5Q9NZZ3 219 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 A0A087WZ62 844 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 CMA1P23946 247 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 TXLNAP40222 546 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 AMHR2Q16671 573 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 ODR4Q5SWX8 454 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 CCDC73Q6ZRK6 1079 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 CLEC17AQ6ZS10 378 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 OTOP2Q7RTS6 562 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 BSNDQ8WZ55 320 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 CDK5RAP3Q96JB5 506 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 SPATA32Q96LK8 384 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
CDH1-204ENST00000562118 CCDC43Q96MW1 224 aaKnown RBP14.89□□□□□ -0.03
CDH1-204ENST00000562118 IPO9Q96P70 1041 aaKnown RBP14.89□□□□□ -0.03
CDH1-204ENST00000562118 SLC9A7Q96T83 725 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 FDXACB1Q9BRP7 624 aaPredicted RBP14.89□□□□□ -0.03
CDH1-204ENST00000562118 NTPCRQ9BSD7 190 aaKnown RBP14.89□□□□□ -0.03
CDH1-204ENST00000562118 GCOM2Q9BZD3 368 aaPredicted RBP14.89□□□□□ -0.03
CDH1-204ENST00000562118 MTIF3Q9H2K0 278 aaKnown RBP14.89□□□□□ -0.03
CDH1-204ENST00000562118 CUEDC2Q9H467 287 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 MINDY3Q9H8M7 445 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 KBTBD4Q9NVX7 518 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 CCDC39Q9UFE4 941 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 ODF2LQ9ULJ1 636 aa14.89□□□□□ -0.03
CDH1-204ENST00000562118 FNDC1Q4ZHG4 1894 aaPredicted RBP14.89□□□□□ -0.03
CDH1-204ENST00000562118 FRMD3A2A2Y4 597 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 RBAK-RBAKDNI3L0D1 243 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 GPR182O15218 404 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 RPS6KA5O75582 802 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 NAMPTP43490 491 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 ME1P48163 572 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 SMAD3P84022 425 aaKnown RBP14.88□□□□□ -0.03
CDH1-204ENST00000562118 MBTD1Q05BQ5 628 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 PAK2Q13177 524 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 IKBKEQ14164 716 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 FAM187BQ17R55 369 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 RTN4RL1Q86UN2 441 aaPredicted RBP14.88□□□□□ -0.03
CDH1-204ENST00000562118 TMEM87AQ8NBN3 555 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 NLRP7Q8WX94 980 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 INO80BQ9C086 356 aaPredicted RBP14.88□□□□□ -0.03
CDH1-204ENST00000562118 CCDC113Q9H0I3 377 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 MAGEF1Q9HAY2 307 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 RC3H2Q9HBD1 1191 aaKnown RBP14.88□□□□□ -0.03
CDH1-204ENST00000562118 BMP2KQ9NSY1 1161 aaPredicted RBP14.88□□□□□ -0.03
CDH1-204ENST00000562118 ARHGAP28Q9P2N2 729 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 ST3GAL5Q9UNP4 418 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 ADGRA3Q8IWK6 1321 aa14.88□□□□□ -0.03
CDH1-204ENST00000562118 MGEA5O60502 916 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 HIP1RO75146 1068 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 FAM189BP81408 668 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 TFDP1Q14186 410 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 MCM6Q14566 821 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 HABP4Q5JVS0 413 aaKnown RBP14.87□□□□□ -0.03
CDH1-204ENST00000562118 RRAGBQ5VZM2 374 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 RNF149Q8NC42 400 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 SPIRE2Q8WWL2 714 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 DNAJC19Q96DA6 116 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 DRC1Q96MC2 740 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 NLRP4Q96MN2 994 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 FIZ1Q96SL8 496 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 PLIN2Q99541 437 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 TNMDQ9H2S6 317 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 FZD8Q9H461 694 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 CHST12Q9NRB3 414 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 RGS18Q9NS28 235 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 AGPAT5Q9NUQ2 364 aa14.87□□□□□ -0.03
CDH1-204ENST00000562118 RALGAPA2Q2PPJ7 1873 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 C9IYK1 514 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 ENPP3O14638 875 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 SFPQP23246 707 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDH1-204ENST00000562118 HOXA11P31270 313 aaPredicted RBP14.86□□□□□ -0.03
CDH1-204ENST00000562118 PHKA2P46019 1235 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 DEFB103AP81534 67 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 GIT2Q14161 759 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 PPP2R5AQ15172 486 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 FAM102BQ5T8I3 360 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 FAM109BQ6ICB4 259 aaPredicted RBP14.86□□□□□ -0.03
CDH1-204ENST00000562118 GPR153Q6NV75 609 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.86□□□□□ -0.033e-8■□□□□ 9.9
CDH1-204ENST00000562118 TOP1MTQ969P6 601 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 PRIMPOLQ96LW4 560 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 PPP1R16BQ96T49 567 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 REEP2Q9BRK0 252 aa14.86□□□□□ -0.03
CDH1-204ENST00000562118 PYM1Q9BRP8 204 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms