RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 CHRNA1P02708 482 aa24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 BMP6P22004 513 aa24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 UNC13DQ70J99 1090 aa24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 DYMQ7RTS9 669 aa24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 PPP1R16BQ96T49 567 aa24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 GDF15Q99988 308 aa24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 ANKEF1Q9NU02 776 aa24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 DBR1Q9UK59 544 aaKnown RBP24.85■■□□□ 1.57
SYNGR3-202ENST00000562045 LAMA3Q16787 3333 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 MAFO75444 373 aaPredicted RBP24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 RHOBTB3O94955 611 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 MGAT3Q09327 533 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 KMT5BQ4FZB7 885 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 C16orf59Q7L2K0 433 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 OTUD6AQ7L8S5 288 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 RPAINQ86UA6 219 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 CCDC155Q8N6L0 562 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 RETREG2Q8NC44 543 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 GTPBP4Q9BZE4 634 aaKnown RBP24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 DHX33Q9H6R0 707 aaKnown RBP24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 GRPEL1Q9HAV7 217 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 EXOC1Q9NV70 894 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 KCND2Q9NZV8 630 aa24.84■■□□□ 1.57
SYNGR3-202ENST00000562045 MAGEB2O15479 319 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 NBNO60934 754 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 VTNP04004 478 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 KRT18P05783 430 aaKnown RBP24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 ACRP10323 421 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 MRE11P49959 708 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 ZNF668Q96K58 619 aaPredicted RBP24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 LBHD1Q9BQE6 289 aaPredicted RBP24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 CDHR5Q9HBB8 845 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 XPNPEP1Q9NQW7 623 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 ARHGEF35A5YM69 484 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 FPGSQ05932 587 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 ZNF658Q5TYW1 1059 aaPredicted RBP24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 DEFB128Q7Z7B8 93 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 TMEM199Q8N511 208 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 DNAJC19Q96DA6 116 aa24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 CCDC43Q96MW1 224 aaKnown RBP24.83■■□□□ 1.57
SYNGR3-202ENST00000562045 RSPH10B2B2RC85 870 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 RSPH10BP0C881 870 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 IDEP14735 1019 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 TCTN1Q2MV58 587 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 ARSHQ5FYA8 562 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 RINT1Q6NUQ1 792 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 CHRDL2Q6WN34 429 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 BPIFA3Q9BQP9 254 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 CBX8Q9HC52 389 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 CDY2AQ9Y6F7 541 aa24.82■■□□□ 1.56
SYNGR3-202ENST00000562045 POLGP54098 1239 aaPredicted RBP24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 MRPS6P82932 125 aaKnown RBP24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 EMC2Q15006 297 aa24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 CT47A1Q5JQC4 288 aaPredicted RBP24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 FAM26DQ5JW98 314 aa24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 CCDC65Q8IXS2 484 aa24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 TMEM143Q96AN5 459 aa24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 L1TD1Q5T7N2 865 aaKnown RBP24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 RUSC1Q9BVN2 902 aa24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 PRO3102Q9H379 93 aa24.81■■□□□ 1.56
SYNGR3-202ENST00000562045 USO1O60763 962 aaKnown RBP24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 CAND2O75155 1236 aa24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 KIZQ2M2Z5 673 aa24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 C1orf186Q6ZWK4 172 aa24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 KSR1Q8IVT5 923 aa24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 SLC7A3Q8WY07 619 aa24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 POLD4Q9HCU8 107 aa24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 PANK4Q9NVE7 773 aa24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 AKT3Q9Y243 479 aa24.8■■□□□ 1.56
SYNGR3-202ENST00000562045 GPR32O75388 356 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 RFC5P40937 340 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 GIT2Q14161 759 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 C9orf50Q5SZB4 431 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 PRPF38BQ5VTL8 546 aaKnown RBP24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 MAEAQ7L5Y9 396 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 RSPH3Q86UC2 560 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 TMEM40Q8WWA1 233 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 REEP2Q9BRK0 252 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 GPRC5CQ9NQ84 441 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 GINS2Q9Y248 185 aa24.79■■□□□ 1.56
SYNGR3-202ENST00000562045 NPHP3-ACAD11A0A0J9YXS1 232 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 FRMD3A2A2Y4 597 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 RAD51AP2Q09MP3 1159 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 PSMD2Q13200 908 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 PADI6Q6TGC4 694 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 NME8Q8N427 588 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 CELF4Q9BZC1 486 aaKnown RBP24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 IL23AQ9NPF7 189 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 SUCLA2Q9P2R7 463 aaPredicted RBP24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 BECN2A8MW95 431 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 TBCAO75347 108 aaKnown RBP24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 GUCY2CP25092 1073 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 NLRP11P59045 1033 aaKnown RBP24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 EHHADHQ08426 723 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 COASYQ13057 564 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 IQCB1Q15051 598 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 UVSSAQ2YD98 709 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 LUZP1Q86V48 1076 aa24.78■■□□□ 1.56
SYNGR3-202ENST00000562045 SMYD4Q8IYR2 804 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms