RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 COL4A3BPQ9Y5P4 624 aa10.58□□□□□ -0.72
NSMCE1-203ENST00000562039 FNDC1Q4ZHG4 1894 aaPredicted RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 MEIS3P2A8K0S8 358 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 NT5C1B-RDH14C9J2C7 533 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 LINC01565O15544 149 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 USO1O60763 962 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 LAMTOR4Q0VGL1 99 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 CLLU1OSQ5K130 101 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 TWF2Q6IBS0 349 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 LRRC55Q6ZSA7 311 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 ADGRD2Q7Z7M1 963 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 NOSTRINQ8IVI9 506 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 ABI1Q8IZP0 508 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 RNF149Q8NC42 400 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 ASAP3Q8TDY4 903 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 POF1BQ8WVV4 589 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 PSPC1Q8WXF1 523 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 CLP1Q92989 425 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 UHRF1Q96T88 793 aaPredicted RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 MTRQ99707 1265 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 HSD17B14Q9BPX1 270 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 C11orf84Q9BUA3 381 aaPredicted RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 FOXP1Q9H334 677 aaPredicted RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 DHX33Q9H6R0 707 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 UBE2ZQ9H832 354 aaPredicted RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 GPRC5CQ9NQ84 441 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 FOXD4L1Q9NU39 408 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 TMEM161AQ9NX61 479 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 CLDND1Q9NY35 253 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 LMCD1Q9NZU5 365 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 NOL7Q9UMY1 257 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 PLAGL2Q9UPG8 496 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 INPP5FQ9Y2H2 1132 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 PCDHB6Q9Y5E3 794 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 TRANK1O15050 2925 aa10.57□□□□□ -0.72
NSMCE1-203ENST00000562039 ATG2AQ2TAZ0 1938 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 RALGAPA2Q2PPJ7 1873 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 PP2D1A8MPX8 630 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 SPATA31C1P0DKV0 1188 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 BMP1P13497 986 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 ATF7P17544 494 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 LIG1P18858 919 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 SFPQP23246 707 aaKnown RBP eCLIP10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 RFC5P40937 340 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 TOB1P50616 345 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 FAM189BP81408 668 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 CAMK1Q14012 370 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 ZRSR1Q15695 479 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 FERMT3Q86UX7 667 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 CDR2LQ86X02 465 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 CATSPER3Q86XQ3 398 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 THNSL1Q8IYQ7 743 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 COLGALT1Q8NBJ5 622 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 SPPL3Q8TCT6 385 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 MICAL1Q8TDZ2 1067 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 CPB2Q96IY4 423 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 CASD1Q96PB1 797 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 JPH2Q9BR39 696 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 GBP3Q9H0R5 595 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 NSUN3Q9H649 340 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 CWH43Q9H720 699 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 IFT122Q9HBG6 1241 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 USP20Q9Y2K6 914 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 ARID2Q68CP9 1835 aa10.56□□□□□ -0.72
NSMCE1-203ENST00000562039 C5orf67F2Z3F1 127 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 H3BQV1 296 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 INO80B-WBP1J3KQ70 363 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 PER2O15055 1255 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 FGF18O76093 207 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 RB1P06400 928 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 IL9P15248 144 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 CDC25AP30304 524 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 CA8P35219 290 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 CCT6AP40227 531 aaKnown RBP10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 RARRES1P49788 294 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 RBM10P98175 930 aaKnown RBP10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 DLX2Q07687 328 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 HYAL1Q12794 435 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 PTGDRQ13258 359 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 ECM1Q16610 540 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 TIGD5Q53EQ6 642 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 ZNF410Q86VK4 478 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 TCP11Q8WWU5 503 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 SYMPKQ92797 1274 aaKnown RBP10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 PLIN2Q99541 437 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 APOL6Q9BWW8 343 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 TMEM117Q9H0C3 514 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 POLR3FQ9H1D9 316 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 COG5Q9UP83 839 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 SMC3Q9UQE7 1217 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 RWDD3Q9Y3V2 267 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 PCDHB12Q9Y5F1 795 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 PLXNA4Q9HCM2 1894 aa10.55□□□□□ -0.72
NSMCE1-203ENST00000562039 A0A0U1RQF3 1178 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 B4GALT5O43286 388 aa10.54□□□□□ -0.72
NSMCE1-203ENST00000562039 GLRA2P23416 452 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms