RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 CRIPAKQ8N1N5 446 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 MICAL1Q8TDZ2 1067 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 GTF3C6Q969F1 213 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 NLRP4Q96MN2 994 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 MBOAT7Q96N66 472 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 PLVAPQ9BX97 442 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 LMAN2LQ9H0V9 348 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 ADAMTS10Q9H324 1103 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 BRMS1Q9HCU9 246 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 TYW1Q9NV66 732 aaKnown RBP9.26□□□□□ -0.93
GINS3-204ENST00000561952 VAV3Q9UKW4 847 aa9.26□□□□□ -0.93
GINS3-204ENST00000561952 A0A087WZ62 844 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 GRXCR2A6NFK2 248 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 PER2O15055 1255 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 TBX10O75333 385 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 FDPSP14324 419 aaKnown RBP9.25□□□□□ -0.93
GINS3-204ENST00000561952 DARSP14868 501 aaKnown RBP9.25□□□□□ -0.93
GINS3-204ENST00000561952 ATP2B1P20020 1258 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 NRIP1P48552 1158 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 PSMC5P62195 406 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 GUCY1B3Q02153 619 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 CAMK1Q14012 370 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 DSC3Q14574 896 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 TARBP2Q15633 366 aaKnown RBP9.25□□□□□ -0.93
GINS3-204ENST00000561952 PLPP4Q5VZY2 271 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 MOXD1Q6UVY6 613 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 ANO5Q75V66 913 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 COLGALT1Q8NBJ5 622 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 NSUN7Q8NE18 718 aaKnown RBP9.25□□□□□ -0.93
GINS3-204ENST00000561952 RDM1Q8NG50 284 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 SPPL3Q8TCT6 385 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 NEK9Q8TD19 979 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 HELQQ8TDG4 1101 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 WASF1Q92558 559 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 CEP170P1Q96L14 293 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 FDXACB1Q9BRP7 624 aaPredicted RBP9.25□□□□□ -0.93
GINS3-204ENST00000561952 LXNQ9BS40 222 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 KCNMB3Q9NPA1 279 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 AAASQ9NRG9 546 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 TMEM161AQ9NX61 479 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 RGL1Q9NZL6 768 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 SUCLA2Q9P2R7 463 aaPredicted RBP9.25□□□□□ -0.93
GINS3-204ENST00000561952 WRAP73Q9P2S5 460 aaPredicted RBP9.25□□□□□ -0.93
GINS3-204ENST00000561952 PIN4Q9Y237 131 aaKnown RBP9.25□□□□□ -0.93
GINS3-204ENST00000561952 PCDHB12Q9Y5F1 795 aa9.25□□□□□ -0.93
GINS3-204ENST00000561952 FGF18O76093 207 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 STBD1O95210 358 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 GCFC2P16383 781 aaKnown RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 LTBRP36941 435 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 QARSP47897 775 aaKnown RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 DNM2P50570 870 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 POLGP54098 1239 aaPredicted RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 PPP2R5CQ13362 524 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 TRIM29Q14134 588 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 CTTNQ14247 550 aaKnown RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 TWF2Q6IBS0 349 aaKnown RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 B3GNT9Q6UX72 402 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 CATSPER4Q7RTX7 472 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 ECHDC2Q86YB7 292 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 CCDC83Q8IWF9 413 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 FAM178BQ8IXR5 827 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 GJD3Q8N144 294 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 HAS1Q92839 578 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 LPPQ93052 612 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 P2RX5Q93086 422 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 PPP2R3CQ969Q6 453 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 TMEM143Q96AN5 459 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 DYDC2Q96IM9 177 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 CASD1Q96PB1 797 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 NIFKQ9BYG3 293 aaKnown RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 GCOM2Q9BZD3 368 aaPredicted RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 CWH43Q9H720 699 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 ENTPD7Q9NQZ7 604 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 CYP26B1Q9NR63 512 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 RNF19AQ9NV58 838 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 BARX2Q9UMQ3 279 aaPredicted RBP9.24□□□□□ -0.93
GINS3-204ENST00000561952 INPP5FQ9Y2H2 1132 aa9.24□□□□□ -0.93
GINS3-204ENST00000561952 A0A087WWV3 80 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 BTBD18B2RXH4 712 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 NT5C1B-RDH14C9J2C7 533 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 WNT7AO00755 349 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 ZBTB39O15060 712 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 MAFO75444 373 aaPredicted RBP9.23□□□□□ -0.93
GINS3-204ENST00000561952 BAG4O95429 457 aaKnown RBP9.23□□□□□ -0.93
GINS3-204ENST00000561952 P4HBP07237 508 aaKnown RBP9.23□□□□□ -0.93
GINS3-204ENST00000561952 SRGAP2CP0DJJ0 459 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 LAG3P18627 525 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 SFPQP23246 707 aaKnown RBP eCLIP9.23□□□□□ -0.93
GINS3-204ENST00000561952 YWHABP31946 246 aaKnown RBP9.23□□□□□ -0.93
GINS3-204ENST00000561952 VASPP50552 380 aaPredicted RBP9.23□□□□□ -0.93
GINS3-204ENST00000561952 ERVFC1P60507 584 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 ST3GAL1Q11201 340 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 CALCRLQ16602 461 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 NAALADL2Q58DX5 795 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 XKR9Q5GH70 373 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 CLLU1OSQ5K130 101 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 PPP4R3AQ6IN85 833 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 LLGL2Q6P1M3 1020 aa9.23□□□□□ -0.93
GINS3-204ENST00000561952 LRRC55Q6ZSA7 311 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms