RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 KPNA1P52294 538 aaPredicted RBP3.41□□□□□ -1.86
CHD9-204ENST00000561869 GYS2P54840 703 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 PHC1P78364 1004 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 RIN1Q13671 783 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 GRM7Q14831 915 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 PRKD1Q15139 912 aaPredicted RBP3.41□□□□□ -1.86
CHD9-204ENST00000561869 TERF2Q15554 542 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 HS1BP3Q53T59 392 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 ZBTB41Q5SVQ8 909 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 SPTY2D1Q68D10 685 aaPredicted RBP3.41□□□□□ -1.86
CHD9-204ENST00000561869 ADGRE4PQ86SQ3 457 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 AHI1Q8N157 1196 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 ZNF808Q8N4W9 903 aaPredicted RBP3.41□□□□□ -1.86
CHD9-204ENST00000561869 C7orf31Q8N865 590 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 ZNF610Q8N9Z0 462 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 PPP1R14CQ8TAE6 165 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 SLC7A6OSQ96CW6 309 aaPredicted RBP3.41□□□□□ -1.86
CHD9-204ENST00000561869 DYDC2Q96IM9 177 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 WDR92Q96MX6 357 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 GPR101Q96P66 508 aaPredicted RBP3.41□□□□□ -1.86
CHD9-204ENST00000561869 ADOQ96SZ5 270 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 ZNF747Q9BV97 191 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 MTG2Q9H4K7 406 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 POLR3BQ9NW08 1133 aaPredicted RBP3.41□□□□□ -1.86
CHD9-204ENST00000561869 USP35Q9P2H5 1018 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 SRRDQ9UH36 339 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 DNAI1Q9UI46 699 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 TMPRSS11EQ9UL52 423 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 RBM8AQ9Y5S9 174 aaKnown RBP3.41□□□□□ -1.86
CHD9-204ENST00000561869 MYPNQ86TC9 1320 aa3.41□□□□□ -1.86
CHD9-204ENST00000561869 PDE8AO60658 829 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 IGSF3O75054 1194 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 FKBP9O95302 570 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 PFKMP08237 780 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 MYCLP1P12525 358 aaPredicted RBP3.4□□□□□ -1.87
CHD9-204ENST00000561869 BPIP17213 487 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 BPIFB4P59827 614 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 TCIRG1Q13488 830 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 TIGD7Q6NT04 549 aaPredicted RBP3.4□□□□□ -1.87
CHD9-204ENST00000561869 CRIP3Q6Q6R5 217 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 FKBP9P1Q75LS8 142 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 RNF180Q86T96 592 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 THNSL2Q86YJ6 484 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 LYSMD2Q8IV50 215 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 ANKRD53Q8N9V6 530 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 PLA2G15Q8NCC3 412 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 OR2W6PQ8NHA6 318 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 RPGRQ92834 1020 aaKnown RBP3.4□□□□□ -1.87
CHD9-204ENST00000561869 EXTL1Q92935 676 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 RPL10LQ96L21 214 aaKnown RBP3.4□□□□□ -1.87
CHD9-204ENST00000561869 OSBPL6Q9BZF3 934 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.4□□□□□ -1.87
CHD9-204ENST00000561869 EMC7Q9NPA0 242 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 MSRAQ9UJ68 235 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 MAPRE3Q9UPY8 281 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 SH3BP1Q9Y3L3 701 aa3.4□□□□□ -1.87
CHD9-204ENST00000561869 PRSS38A1L453 326 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 OVOL3O00110 214 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 APOL3O95236 402 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 AMHP03971 560 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 VSIG10L2P0DP72 767 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 ACVRL1P37023 503 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 DHCR24Q15392 516 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 GAGE13Q4V321 117 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 STRA8Q7Z7C7 330 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 PASD1Q8IV76 773 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 SLC41A1Q8IVJ1 513 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 ZFPM1Q8IX07 1006 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 PIK3C3Q8NEB9 887 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 LEO1Q8WVC0 666 aaPredicted RBP3.39□□□□□ -1.87
CHD9-204ENST00000561869 GCDHQ92947 438 aaPredicted RBP3.39□□□□□ -1.87
CHD9-204ENST00000561869 ZNF503Q96F45 646 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 FAM89AQ96GI7 184 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 TMEM176AQ96HP8 235 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 FDXACB1Q9BRP7 624 aaPredicted RBP3.39□□□□□ -1.87
CHD9-204ENST00000561869 NOL10Q9BSC4 688 aaKnown RBP3.39□□□□□ -1.87
CHD9-204ENST00000561869 PRDM12Q9H4Q4 367 aa3.39□□□□□ -1.87
CHD9-204ENST00000561869 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.39□□□□□ -1.87
CHD9-204ENST00000561869 USP36Q9P275 1121 aaKnown RBP3.39□□□□□ -1.87
CHD9-204ENST00000561869 UBE2QL1A1L167 161 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 TOX4O94842 621 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 SEC24DO94855 1032 aaPredicted RBP3.38□□□□□ -1.87
CHD9-204ENST00000561869 PCDH8O95206 1070 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 GAAP10253 952 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 ACRV1P26436 265 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 HSD3B2P26439 372 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 LSP1P33241 339 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 KIR2DL3P43628 341 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 ID4P47928 161 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 HMGA2P52926 109 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 IL2P60568 153 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 OCRLQ01968 901 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 CD69Q07108 199 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 FOXE3Q13461 319 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 USP39Q53GS9 565 aaKnown RBP3.38□□□□□ -1.87
CHD9-204ENST00000561869 MIIPQ5JXC2 388 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 BROXQ5VW32 411 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 SDE2Q6IQ49 451 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 RNF207Q6ZRF8 634 aa3.38□□□□□ -1.87
CHD9-204ENST00000561869 ESPNLQ6ZVH7 1005 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms