RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 EIF2AK1Q9BQI3 630 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 TMEM60Q9H2L4 133 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 ZSWIM4Q9H7M6 989 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 SH2B1Q9NRF2 756 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 CLDND1Q9NY35 253 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 COL4A3BPQ9Y5P4 624 aa19.23■□□□□ 0.67
CDC42BPB-208ENST00000561271 ATF7P17544 494 aaPredicted RBP19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 IRS1P35568 1242 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 RFC5P40937 340 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 HYAL1Q12794 435 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 LEXMQ3ZCV2 418 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 NAALADL2Q58DX5 795 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 CLLU1OSQ5K130 101 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 COLGALT1Q8NBJ5 622 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 SPPL3Q8TCT6 385 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 PABPC5Q96DU9 382 aaKnown RBP19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 MTMR9Q96QG7 549 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 TMEM117Q9H0C3 514 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 TYW1Q9NV66 732 aaKnown RBP19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 PIN4Q9Y237 131 aaKnown RBP19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 PPME1Q9Y570 386 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 PCDHGC5Q9Y5F6 944 aa19.22■□□□□ 0.67
CDC42BPB-208ENST00000561271 HOXA2O43364 376 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 SLITRK3O94933 977 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 GTF2F1P35269 517 aaKnown RBP eCLIP19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 CDC42EP1Q00587 391 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 COL19A1Q14993 1142 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 ABI1Q8IZP0 508 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 LRRC43Q8N309 656 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 FAM184AQ8NB25 1140 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 NEK9Q8TD19 979 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 POF1BQ8WVV4 589 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 PSPC1Q8WXF1 523 aaKnown RBP19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 CASD1Q96PB1 797 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 CWH43Q9H720 699 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 IFT122Q9HBG6 1241 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 AAASQ9NRG9 546 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 DACT1Q9NYF0 836 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 PCDHB12Q9Y5F1 795 aa19.21■□□□□ 0.67
CDC42BPB-208ENST00000561271 A0A0U1RQF3 1178 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 IL9P15248 144 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 LAG3P18627 525 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 RABEP1Q15276 862 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 TWF2Q6IBS0 349 aaKnown RBP19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 LRRC55Q6ZSA7 311 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 OTUD6AQ7L8S5 288 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 CATSPER4Q7RTX7 472 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 ADGRD2Q7Z7M1 963 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 ZNF598Q86UK7 904 aaKnown RBP19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 THNSL1Q8IYQ7 743 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 FBXO18Q8NFZ0 1043 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 HELQQ8TDG4 1101 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 PRPF31Q8WWY3 499 aaKnown RBP19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 MTRQ99707 1265 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 FOXP1Q9H334 677 aaPredicted RBP19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 XPNPEP1Q9NQW7 623 aa19.2■□□□□ 0.66
CDC42BPB-208ENST00000561271 LINC01565O15544 149 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 FGF18O76093 207 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 SRGAP2CP0DJJ0 459 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 PBX3P40426 434 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 LAMTOR4Q0VGL1 99 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 GNL2Q13823 731 aaKnown RBP19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 PTCRAQ6ISU1 281 aaPredicted RBP19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 EXOC8Q8IYI6 725 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 LPPQ93052 612 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 CCDC43Q96MW1 224 aaKnown RBP19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 HSD17B14Q9BPX1 270 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 INO80BQ9C086 356 aaPredicted RBP19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 IGFLR1Q9H665 355 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 MINDY3Q9H8M7 445 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 CHST12Q9NRB3 414 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 MYH15Q9Y2K3 1946 aa19.19■□□□□ 0.66
CDC42BPB-208ENST00000561271 GAS2O43903 313 aaKnown RBP19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 TBX10O75333 385 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 LYPLA2O95372 231 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 LTBRP36941 435 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 PHKA2P46019 1235 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 DLX2Q07687 328 aaPredicted RBP19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 ZNF174Q15697 407 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 CLUL1Q15846 466 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 LONRF3Q496Y0 759 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 TTC38Q5R3I4 469 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 FERMT3Q86UX7 667 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 TCP11Q8WWU5 503 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 AGPAT5Q9NUQ2 364 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 CITO14578 2027 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 PLXNA3P51805 1871 aa19.18■□□□□ 0.66
CDC42BPB-208ENST00000561271 A0A087WWV3 80 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 MEIS3P2A8K0S8 358 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 EOMESO95936 686 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 OR52Z1P0C646 297 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 NBR1Q14596 966 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 CTC1Q2NKJ3 1217 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 NOSTRINQ8IVI9 506 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 RNF149Q8NC42 400 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 PIGOQ8TEQ8 1089 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 TLR9Q9NR96 1032 aa19.17■□□□□ 0.66
CDC42BPB-208ENST00000561271 ANKEF1Q9NU02 776 aa19.17■□□□□ 0.66
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