RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 MYLIPQ8WY64 445 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 ZNF622Q969S3 477 aaKnown RBP eCLIP7.37□□□□□ -1.23
LRRC28-220ENST00000561253 ASIC4Q96FT7 647 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 SCLYQ96I15 445 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 TMX1Q9H3N1 280 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 INTS7Q9NVH2 962 aaKnown RBP7.37□□□□□ -1.23
LRRC28-220ENST00000561253 MARCH2Q9P0N8 246 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 GPR160Q9UJ42 338 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 ATP6V0A2Q9Y487 856 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 LRRC37AA6NMS7 1700 aa7.37□□□□□ -1.23
LRRC28-220ENST00000561253 TAF1P21675 1872 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 ARFGEF1Q9Y6D6 1849 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 PNMA6EA0A0J9YXQ4 647 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 NPHP1O15259 732 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 OPA1O60313 960 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 PSPNO60542 156 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 GNAI2P04899 355 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 PRKCAP17252 672 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 NCLP19338 710 aaKnown RBP7.36□□□□□ -1.23
LRRC28-220ENST00000561253 SDSP20132 328 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 ALDH1B1P30837 517 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 BCL6P41182 706 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 TM4SF20Q53R12 229 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 CEP85Q6P2H3 762 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 CEP68Q76N32 757 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 DDX46Q7L014 1031 aaKnown RBP7.36□□□□□ -1.23
LRRC28-220ENST00000561253 FILIP1Q7Z7B0 1213 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 LILRA2Q8N149 483 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-220ENST00000561253 SSH3Q8TE77 659 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 USP33Q8TEY7 942 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 DPF3Q92784 378 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 RPGRQ92834 1020 aaKnown RBP7.36□□□□□ -1.23
LRRC28-220ENST00000561253 TMEM169Q96HH4 297 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
LRRC28-220ENST00000561253 RTFDC1Q9BY42 306 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-220ENST00000561253 SPC25Q9HBM1 224 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 DDX19BQ9UMR2 479 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 RWDD3Q9Y3V2 267 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 MYH3P11055 1940 aa7.36□□□□□ -1.23
LRRC28-220ENST00000561253 COL4A5P29400 1685 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 NOTOA8MTQ0 251 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 DNAJC8O75937 253 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-220ENST00000561253 FUCA1P04066 466 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 ASLP04424 464 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 MYCLP1P12525 358 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-220ENST00000561253 TRHRP34981 398 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-220ENST00000561253 IGFALSP35858 605 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 FLT3P36888 993 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 AFMP43652 599 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 PAK1Q13153 545 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 CNNM4Q6P4Q7 775 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 ATG9AQ7Z3C6 839 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 TEX2Q8IWB9 1127 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 ZC3H7AQ8IWR0 971 aaKnown RBP7.35□□□□□ -1.23
LRRC28-220ENST00000561253 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 LZTR1Q8N653 840 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 VGLL2Q8N8G2 317 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 TRMT2BQ96GJ1 504 aaKnown RBP7.35□□□□□ -1.23
LRRC28-220ENST00000561253 PLCD4Q9BRC7 762 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 PUS3Q9BZE2 481 aaKnown RBP7.35□□□□□ -1.23
LRRC28-220ENST00000561253 PDLIM7Q9NR12 457 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 CLDND1Q9NY35 253 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.35□□□□□ -1.23
LRRC28-220ENST00000561253 FBXL7Q9UJT9 491 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 ACSL6Q9UKU0 697 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 RIPOR2Q9Y4F9 1068 aa7.35□□□□□ -1.23
LRRC28-220ENST00000561253 TNPO3Q9Y5L0 923 aaKnown RBP7.35□□□□□ -1.23
LRRC28-220ENST00000561253 FER1L6Q2WGJ9 1857 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 TCRBV16S1A1N1A0A5B0 115 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 B4E1Z4 1266 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 DNAJC6O75061 913 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 SOD2P04179 222 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 GRK2P25098 689 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 TACR1P25103 407 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 GRK3P35626 688 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 MASP1P48740 699 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 GPSM2P81274 684 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 CYP4F8P98187 520 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 ATP8B2P98198 1209 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 MVKQ03426 396 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 IFIT5Q13325 482 aaKnown RBP7.34□□□□□ -1.23
LRRC28-220ENST00000561253 SNX17Q15036 470 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 TIGD5Q53EQ6 642 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 LRRTM3Q86VH5 581 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 ABHD4Q8TB40 342 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 KLHDC4Q8TBB5 520 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 CDC5LQ99459 802 aaKnown RBP7.34□□□□□ -1.23
LRRC28-220ENST00000561253 PSMD1Q99460 953 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 SP110Q9HB58 689 aa7.34□□□□□ -1.23
LRRC28-220ENST00000561253 PA2G4Q9UQ80 394 aaKnown RBP7.34□□□□□ -1.23
LRRC28-220ENST00000561253 COA3Q9Y2R0 106 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-220ENST00000561253 NOP58Q9Y2X3 529 aaKnown RBP7.34□□□□□ -1.23
LRRC28-220ENST00000561253 ANKRD18BA2A2Z9 1011 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 C22orf46C9J442 243 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 FAM47E-STBD1D6RA91 191 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 H7BY64 318 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 SNAP23O00161 211 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 ARVCFO00192 962 aa7.33□□□□□ -1.24
LRRC28-220ENST00000561253 SRGAP2CP0DJJ0 459 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms