RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 NEFLP07196 543 aa30.37■■■□□ 2.45
SNRPA1-215ENST00000561187 CA8P35219 290 aa30.37■■■□□ 2.45
SNRPA1-215ENST00000561187 GALNT17Q6IS24 598 aa30.37■■■□□ 2.45
SNRPA1-215ENST00000561187 MOXD1Q6UVY6 613 aa30.37■■■□□ 2.45
SNRPA1-215ENST00000561187 PIK3AP1Q6ZUJ8 805 aa30.37■■■□□ 2.45
SNRPA1-215ENST00000561187 LPPQ93052 612 aa30.37■■■□□ 2.45
SNRPA1-215ENST00000561187 PHF20Q9BVI0 1012 aa30.37■■■□□ 2.45
SNRPA1-215ENST00000561187 PIN4Q9Y237 131 aaKnown RBP30.37■■■□□ 2.45
SNRPA1-215ENST00000561187 HIDE1A8MVS5 230 aa30.36■■■□□ 2.45
SNRPA1-215ENST00000561187 NT5C1B-RDH14C9J2C7 533 aa30.36■■■□□ 2.45
SNRPA1-215ENST00000561187 CDKL5O76039 1030 aa30.36■■■□□ 2.45
SNRPA1-215ENST00000561187 NPEPPSP55786 919 aa30.36■■■□□ 2.45
SNRPA1-215ENST00000561187 ANO5Q75V66 913 aa30.36■■■□□ 2.45
SNRPA1-215ENST00000561187 NEK8Q86SG6 692 aa30.36■■■□□ 2.45
SNRPA1-215ENST00000561187 VAV3Q9UKW4 847 aa30.36■■■□□ 2.45
SNRPA1-215ENST00000561187 A0A0U1RQF3 1178 aa30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 CCNT1O60563 726 aaKnown RBP30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 DNM2P50570 870 aa30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 PSMC5P62195 406 aa30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 TWF2Q6IBS0 349 aaKnown RBP30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 ZNF598Q86UK7 904 aaKnown RBP30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 ZNF710Q8N1W2 664 aa30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 DACT1Q9NYF0 836 aa30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 PUF60Q9UHX1 559 aaKnown RBP30.35■■■□□ 2.45
SNRPA1-215ENST00000561187 IGKV6-21A0A0C4DH24 114 aa30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 FAM205CA6NFA0 338 aa30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 SFPQP23246 707 aaKnown RBP eCLIP30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 FOSBP53539 338 aa30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 PLCB3Q01970 1234 aa30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 TMC7Q7Z402 723 aa30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 ZNF579Q8NAF0 562 aaKnown RBP30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 RPGRIP1Q96KN7 1286 aa30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 SPG21Q9NZD8 308 aa30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 WRAP73Q9P2S5 460 aaPredicted RBP30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 INPP5FQ9Y2H2 1132 aa30.34■■■□□ 2.45
SNRPA1-215ENST00000561187 STK36Q9NRP7 1315 aa30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 MAFO75444 373 aaPredicted RBP30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 SP100P23497 879 aaPredicted RBP30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 PPM1AP35813 382 aa30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 TECP42680 631 aa30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 EARS2Q5JPH6 523 aaKnown RBP30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 CATSPER4Q7RTX7 472 aa30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 POTEDQ86YR6 584 aa30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 KCNMB3Q9NPA1 279 aa30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 LZTS1Q9Y250 596 aa30.33■■■□□ 2.45
SNRPA1-215ENST00000561187 MEIS3P2A8K0S8 358 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 MARCH6O60337 910 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 PFKFB2O60825 505 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 ZC3H11AO75152 810 aaKnown RBP eCLIP30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 CTDNEP1O95476 244 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 PHKA2P46019 1235 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 KRT17Q04695 432 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 PPP2R5CQ13362 524 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 NCAPH2Q6IBW4 605 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 HFE2Q6ZVN8 426 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 CDCA3Q99618 268 aaPredicted RBP30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 CYP26B1Q9NR63 512 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 ORC3Q9UBD5 711 aaPredicted RBP30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 CDH22Q9UJ99 828 aa30.32■■■□□ 2.44
SNRPA1-215ENST00000561187 XBP1P17861 261 aa30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 QARSP47897 775 aaKnown RBP30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 AK2P54819 239 aa30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 HERC4Q5GLZ8 1057 aaPredicted RBP30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 PDE12Q6L8Q7 609 aaKnown RBP30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 ZNF410Q86VK4 478 aa30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 SLC39A11Q8N1S5 342 aa30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 NECAB1Q8N987 351 aa30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 TMEM143Q96AN5 459 aa30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 CEP170P1Q96L14 293 aa30.31■■■□□ 2.44
SNRPA1-215ENST00000561187 TECTAO75443 2155 aa30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 EOMESO95936 686 aa30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 POLGP54098 1239 aaPredicted RBP30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 BCAR1P56945 870 aa30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 NR5A1Q13285 461 aa30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 FAM177A1Q8N128 213 aaPredicted RBP30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 HAS1Q92839 578 aa30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 LXNQ9BS40 222 aa30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 MRPL9Q9BYD2 267 aaKnown RBP30.3■■■□□ 2.44
SNRPA1-215ENST00000561187 LARGE1O95461 756 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 SRGAP2BP0DMP2 458 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 CYP4A11Q02928 519 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 ANKRD54Q6NXT1 300 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 TMEM173Q86WV6 379 aaPredicted RBP30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 FAM20AQ96MK3 541 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 PHF7Q9BWX1 381 aaPredicted RBP30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 GBP3Q9H0R5 595 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 NGRNQ9NPE2 291 aaKnown RBP30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 RGL1Q9NZL6 768 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 COL4A3BPQ9Y5P4 624 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 WDFY4Q6ZS81 3184 aa30.29■■■□□ 2.44
SNRPA1-215ENST00000561187 LOC730098B7Z3J9 87 aa30.28■■■□□ 2.44
SNRPA1-215ENST00000561187 GCFC2P16383 781 aaKnown RBP30.28■■■□□ 2.44
SNRPA1-215ENST00000561187 PPP4R3AQ6IN85 833 aa30.28■■■□□ 2.44
SNRPA1-215ENST00000561187 AUTS2Q8WXX7 1259 aa30.28■■■□□ 2.44
SNRPA1-215ENST00000561187 SLC7A3Q8WY07 619 aa30.28■■■□□ 2.44
SNRPA1-215ENST00000561187 CHST12Q9NRB3 414 aa30.28■■■□□ 2.44
SNRPA1-215ENST00000561187 FAM105AQ9NUU6 356 aa30.28■■■□□ 2.44
SNRPA1-215ENST00000561187 SRGAP2CP0DJJ0 459 aa30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 ALDH7A1P49419 539 aaKnown RBP30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 CDC42EP1Q00587 391 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms