RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MCM3APO60318 1980 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 CLIC2O15247 247 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 MAPK13O15264 365 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 MAFO75444 373 aaPredicted RBP18.77■□□□□ 0.6
HDDC3-206ENST00000561036 TRIM21P19474 475 aaKnown RBP18.77■□□□□ 0.6
HDDC3-206ENST00000561036 KRT9P35527 623 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 ARL2P36404 184 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 ZBED6P86452 979 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 GOLGA8FQ08AF8 430 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 GOLGA8DPQ0D2H9 430 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 TSR1Q2NL82 804 aaKnown RBP18.77■□□□□ 0.6
HDDC3-206ENST00000561036 TMTC1Q8IUR5 882 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 MAP4K3Q8IVH8 894 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 KSR1Q8IVT5 923 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 FAM186BQ8IYM0 893 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 ZNF397Q8NF99 534 aaPredicted RBP18.77■□□□□ 0.6
HDDC3-206ENST00000561036 PPTC7Q8NI37 304 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 BORCS6Q96GS4 357 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 PCMTD1Q96MG8 357 aaPredicted RBP18.77■□□□□ 0.6
HDDC3-206ENST00000561036 DNAJC7Q99615 494 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 JPH2Q9BR39 696 aaPredicted RBP18.77■□□□□ 0.6
HDDC3-206ENST00000561036 ABHD10Q9NUJ1 306 aa18.77■□□□□ 0.6
HDDC3-206ENST00000561036 ABT1Q9ULW3 272 aaKnown RBP18.77■□□□□ 0.6
HDDC3-206ENST00000561036 TTC26A0AVF1 554 aa18.76■□□□□ 0.59
HDDC3-206ENST00000561036 RASSF10A6NK89 507 aa18.76■□□□□ 0.59
HDDC3-206ENST00000561036 AFPP02771 609 aaKnown RBP18.76■□□□□ 0.59
HDDC3-206ENST00000561036 XRCC5P13010 732 aaKnown RBP18.76■□□□□ 0.59
HDDC3-206ENST00000561036 ACVR2BQ13705 512 aa18.76■□□□□ 0.59
HDDC3-206ENST00000561036 CCAR2Q8N163 923 aaKnown RBP18.76■□□□□ 0.59
HDDC3-206ENST00000561036 C17orf53Q8N3J3 647 aaPredicted RBP18.76■□□□□ 0.59
HDDC3-206ENST00000561036 NPLOC4Q8TAT6 608 aa18.76■□□□□ 0.59
HDDC3-206ENST00000561036 BSNDQ8WZ55 320 aa18.76■□□□□ 0.59
HDDC3-206ENST00000561036 USP6NLQ92738 828 aa18.76■□□□□ 0.59
HDDC3-206ENST00000561036 COPS5Q92905 334 aa18.76■□□□□ 0.59
HDDC3-206ENST00000561036 ARHGAP28Q9P2N2 729 aa18.76■□□□□ 0.59
HDDC3-206ENST00000561036 DENND3A2RUS2 1198 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 HBP1O60381 514 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 OFD1O75665 1012 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 NAMPTP43490 491 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 CASP4P49662 377 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 KCNH2Q12809 1159 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 PLCB4Q15147 1175 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 DUSP28Q4G0W2 176 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 IER5Q5VY09 327 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 E4F1Q66K89 784 aaPredicted RBP18.75■□□□□ 0.59
HDDC3-206ENST00000561036 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.75■□□□□ 0.59
HDDC3-206ENST00000561036 TCP11Q8WWU5 503 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 SOCS4Q8WXH5 440 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 ERAP1Q9NZ08 941 aa18.75■□□□□ 0.59
HDDC3-206ENST00000561036 GTPBP10A4D1E9 387 aaKnown RBP18.74■□□□□ 0.59
HDDC3-206ENST00000561036 CA12O43570 354 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 EXOC3O60645 756 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 PPFIA4O75335 1185 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 ALDH1A1P00352 501 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 CYP2J2P51589 502 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 MCCD1P59942 119 aaPredicted RBP18.74■□□□□ 0.59
HDDC3-206ENST00000561036 HSP90AA2PQ14568 343 aaPredicted RBP18.74■□□□□ 0.59
HDDC3-206ENST00000561036 BRDTQ58F21 947 aaPredicted RBP18.74■□□□□ 0.59
HDDC3-206ENST00000561036 OLFML2BQ68BL8 750 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 CYP26C1Q6V0L0 522 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 NEK11Q8NG66 645 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 PHLPP2Q6ZVD8 1323 aa18.74■□□□□ 0.59
HDDC3-206ENST00000561036 IGKV6-21A0A0C4DH24 114 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 RNF225M0QZC1 329 aaPredicted RBP18.73■□□□□ 0.59
HDDC3-206ENST00000561036 ZSCAN12O43309 604 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 TOMM70O94826 608 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 HOXD8P13378 290 aaPredicted RBP18.73■□□□□ 0.59
HDDC3-206ENST00000561036 GLRA2P23416 452 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 RGS2P41220 211 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 ADCYAP1R1P41586 468 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 SOX10P56693 466 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 CDK17Q00537 523 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 ENPEPQ07075 957 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 KCNMA1Q12791 1236 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 ZNF484Q5JVG2 852 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 REM2Q8IYK8 340 aaPredicted RBP18.73■□□□□ 0.59
HDDC3-206ENST00000561036 XXYLT1Q8NBI6 393 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 SLC35C1Q96A29 364 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 NUCKS1Q9H1E3 243 aaKnown RBP18.73■□□□□ 0.59
HDDC3-206ENST00000561036 IKZF4Q9H2S9 585 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 MMRN2Q9H8L6 949 aa18.73■□□□□ 0.59
HDDC3-206ENST00000561036 ZNHIT6Q9NWK9 470 aaKnown RBP18.73■□□□□ 0.59
HDDC3-206ENST00000561036 COL1A2P08123 1366 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 GOLGA6L9A6NEM1 432 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 ZBTB42B2RXF5 422 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 TUBB4AP04350 444 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 LGALS2P05162 132 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 KRT13P13646 458 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 HNRNPH3P31942 346 aaKnown RBP18.72■□□□□ 0.59
HDDC3-206ENST00000561036 KLK7P49862 253 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 CRHR2Q13324 411 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 MXD4Q14582 209 aaPredicted RBP18.72■□□□□ 0.59
HDDC3-206ENST00000561036 MEA1Q16626 185 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 TMEM63BQ5T3F8 832 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 INTS8Q75QN2 995 aaKnown RBP18.72■□□□□ 0.59
HDDC3-206ENST00000561036 ASAP3Q8TDY4 903 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 AFG1LQ8WV93 481 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 TMEM143Q96AN5 459 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 TMEM134Q9H6X4 195 aa18.72■□□□□ 0.59
HDDC3-206ENST00000561036 PLCB1Q9NQ66 1216 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms