RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CTNNA1P35221 906 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 CCNG1P51959 295 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 STAT2P52630 851 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 ODF2Q5BJF6 829 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 ARSHQ5FYA8 562 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 ARHGAP27Q6ZUM4 889 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 CATSPER3Q86XQ3 398 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 MFN1Q8IWA4 741 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 ERMNQ8TAM6 284 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 THOC1Q96FV9 657 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 GOPCQ9HD26 462 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 LUC7LQ9NQ29 371 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 SMARCAL1Q9NZC9 954 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 ABLIM1O14639 778 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 MSH4O15457 936 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 MAGEA1P43355 309 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 RPS6KA3P51812 740 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 FAM83BQ5T0W9 1011 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 ERMARDQ5T6L9 678 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 OGFOD1Q8N543 542 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 CALR3Q96L12 384 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 FAM129AQ9BZQ8 928 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 SLC5A4Q9NY91 659 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 EHD2Q9NZN4 543 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 TBC1D7Q9P0N9 293 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 STK24Q9Y6E0 443 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 PITPNM2Q9BZ72 1349 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 SSU72P8A0A1W2PR75 194 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 ESYT3A0FGR9 886 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 AKR1B10O60218 316 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 SPATA31C1P0DKV0 1188 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 KCNA3P22001 575 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 RPA1P27694 616 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 PEX19P40855 299 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 FKBP3Q00688 224 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 HERC4Q5GLZ8 1057 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 FKBP1CQ5VVH2 108 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 KRT26Q7Z3Y9 468 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 SPDYE1Q8NFV5 336 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 PARD3BQ8TEW8 1205 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 ZNF570Q96NI8 536 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 KRT12Q99456 494 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 ARHGAP20Q9P2F6 1191 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 VAV3Q9UKW4 847 aa15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
RABGGTA-220ENST00000560998 BHMG1C9JSJ3 638 aaPredicted RBP15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 EPHB6O15197 1021 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 NCK2O43639 380 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 DPEP1P16444 411 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 FERP16591 822 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 RAB27AP51159 221 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 EIF3BP55884 814 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 SLC5A9Q2M3M2 681 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 CCDC84Q86UT8 332 aaPredicted RBP15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 SCFD1Q8WVM8 642 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 CEP63Q96MT8 703 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 XPO6Q96QU8 1125 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 EDEM3Q9BZQ6 932 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 COL4A3BPQ9Y5P4 624 aa15.12■□□□□ 0.01
RABGGTA-220ENST00000560998 ZSCAN5CA6NGD5 496 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 A6NHS1 94 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 RBAK-RBAKDNI3L0D1 243 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 TRAF5O00463 557 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 TBC1D12O60347 775 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 KRT18P05783 430 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 TMOD1P28289 359 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 EIF4A3P38919 411 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 ZNF131P52739 623 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 PSMC6P62333 389 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 UAP1Q16222 522 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 SYT2Q8N9I0 419 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 CYP2W1Q8TAV3 490 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 INPP4AQ96PE3 977 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 PSMB7Q99436 277 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 KCTD10Q9H3F6 313 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 FAM207AQ9NSI2 230 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 TMEM59LQ9UK28 342 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 DNM3Q9UQ16 869 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 MEIS1O00470 390 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 RAD51CO43502 376 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 ATP2C2O75185 946 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 ECHS1P30084 290 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 ZNF76P36508 570 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 HLTFQ14527 1009 aaKnown RBP eCLIP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 SLC30A9Q6PML9 568 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 CDAN1Q8IWY9 1227 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 NELFCDQ8IXH7 590 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 ZC3H3Q8IXZ2 948 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 MTMR14Q8NCE2 650 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 AGAP11Q8TF27 550 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 TLCD1Q96CP7 247 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 NSRP1Q9H0G5 558 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 NUCKS1Q9H1E3 243 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 VPS33BQ9H267 617 aa15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 RANBP17Q9H2T7 1088 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-220ENST00000560998 MMRN2Q9H8L6 949 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms