RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 HAS1Q92839 578 aa17.8■□□□□ 0.44
TPM1-228ENST00000560975 CELF1Q92879 486 aaKnown RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 NAP1L3Q99457 506 aaPredicted RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 CHORDC1Q9UHD1 332 aaPredicted RBP17.8■□□□□ 0.44
TPM1-228ENST00000560975 DPPA5A6NC42 116 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 CLIC2O15247 247 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 RASA1P20936 1047 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 PTGIRP43119 386 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 NPEPPSP55786 919 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 GBP7Q8N8V2 638 aaPredicted RBP17.79■□□□□ 0.44
TPM1-228ENST00000560975 CARD9Q9H257 536 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 DNAJC17Q9NVM6 304 aaKnown RBP17.79■□□□□ 0.44
TPM1-228ENST00000560975 TAS2R14Q9NYV8 317 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 CNOT7Q9UIV1 285 aaKnown RBP17.79■□□□□ 0.44
TPM1-228ENST00000560975 PCDHA12Q9UN75 941 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 PCDHB13Q9Y5F0 798 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 A6NHS1 94 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 HIP1RO75146 1068 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 LUC7L3O95232 432 aaKnown RBP17.79■□□□□ 0.44
TPM1-228ENST00000560975 HIBADHP31937 336 aaKnown RBP17.79■□□□□ 0.44
TPM1-228ENST00000560975 SEPT2Q15019 361 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 DIXDC1Q155Q3 683 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 ASRGL1Q7L266 308 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 FBXO33Q7Z6M2 555 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 PLCD4Q9BRC7 762 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 THAP2Q9H0W7 228 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 RXFP1Q9HBX9 757 aa17.79■□□□□ 0.44
TPM1-228ENST00000560975 SNUPNO95149 360 aaKnown RBP17.78■□□□□ 0.44
TPM1-228ENST00000560975 CYP11B2P19099 503 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 PCK1P35558 622 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 STAT1P42224 750 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 KCNJ1P48048 391 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 JAM2P57087 298 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 TNIP1Q15025 636 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 SEPT14Q6ZU15 432 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 PRELID2Q8N945 189 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 KRT35Q92764 455 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 STAT3P40763 770 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 PPATQ06203 517 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 MGAT5Q09328 741 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 RBBP5Q15291 538 aaKnown RBP17.78■□□□□ 0.44
TPM1-228ENST00000560975 FRMD5Q7Z6J6 570 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 ZDHHC14Q8IZN3 488 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 CRAMP1Q96RY5 1269 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 EYA3Q99504 573 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 COG5Q9UP83 839 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 PFASO15067 1338 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 LAMB1P07942 1786 aa17.78■□□□□ 0.44
TPM1-228ENST00000560975 PHF2O75151 1096 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 FERP16591 822 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 ORC2Q13416 577 aaPredicted RBP17.77■□□□□ 0.44
TPM1-228ENST00000560975 EDRF1Q3B7T1 1238 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 PARP10Q53GL7 1025 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 CCDC137Q6PK04 289 aaKnown RBP17.77■□□□□ 0.44
TPM1-228ENST00000560975 VSTM1Q6UX27 236 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 PALB2Q86YC2 1186 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 TGS1Q96RS0 853 aaKnown RBP17.77■□□□□ 0.44
TPM1-228ENST00000560975 TRIM7Q9C029 511 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 BCAS3Q9H6U6 928 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 ETAA1Q9NY74 926 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 KLHL33A6NCF5 533 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 H0Y3Z8 333 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 SMIM24O75264 130 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 GJB6O95452 261 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 VCAM1P19320 739 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 TUBP50607 506 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 RAD23BP54727 409 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 MPP2Q14168 576 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 PPP2R5EQ16537 467 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 FAM47EQ6ZV65 393 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 CCDC105Q8IYK2 499 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 UTP4Q969X6 686 aaKnown RBP17.77■□□□□ 0.44
TPM1-228ENST00000560975 TMEM237Q96Q45 408 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 POP1Q99575 1024 aaKnown RBP17.77■□□□□ 0.44
TPM1-228ENST00000560975 IKZF4Q9H2S9 585 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 KLHL14Q9P2G3 628 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 INTUQ9ULD6 942 aa17.77■□□□□ 0.44
TPM1-228ENST00000560975 KIAA1551Q9HCM1 1747 aa17.77■□□□□ 0.43
TPM1-228ENST00000560975 TCRBV7S2A1N4TA0A589 114 aa17.77■□□□□ 0.43
TPM1-228ENST00000560975 SPDYE5A6NIY4 337 aa17.77■□□□□ 0.43
TPM1-228ENST00000560975 MAP3K13O43283 966 aa17.77■□□□□ 0.43
TPM1-228ENST00000560975 ARSHQ5FYA8 562 aa17.77■□□□□ 0.43
TPM1-228ENST00000560975 KSR1Q8IVT5 923 aa17.77■□□□□ 0.43
TPM1-228ENST00000560975 BSDC1Q9NW68 430 aaPredicted RBP17.77■□□□□ 0.43
TPM1-228ENST00000560975 TBK1Q9UHD2 729 aa17.77■□□□□ 0.43
TPM1-228ENST00000560975 POTEFA5A3E0 1075 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 MEIS1O00470 390 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 LIN7AO14910 233 aaPredicted RBP17.76■□□□□ 0.43
TPM1-228ENST00000560975 CAMTA2O94983 1202 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 TMEM253P0C7T8 217 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 POTEIP0CG38 1075 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 ANO7Q6IWH7 933 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 POTEGQ6S5H5 508 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 POTEEQ6S8J3 1075 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 TXNRD3Q86VQ6 643 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 SFR1Q86XK3 245 aa17.76■□□□□ 0.43
TPM1-228ENST00000560975 TSC22D3Q99576 134 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms