RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 GAP43P17677 238 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 CYP2C18P33260 490 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 EFNA5P52803 228 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 PPIGQ13427 754 aaKnown RBP eCLIP13.41□□□□□ -0.266e-8■■■■□ 20.5
IRF9-211ENST00000560852 CAPSQ13938 189 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 LPIN1Q14693 890 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 ZRSR1Q15695 479 aaKnown RBP13.41□□□□□ -0.26
IRF9-211ENST00000560852 PPP4R3CPQ6ZMV5 832 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 TSHZ1Q6ZSZ6 1077 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 ASAP3Q8TDY4 903 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 APBB2Q92870 758 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 PAGE5Q96GU1 130 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 CCDC34Q96HJ3 373 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 REEP2Q9BRK0 252 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 GCOM2Q9BZD3 368 aaPredicted RBP13.41□□□□□ -0.26
IRF9-211ENST00000560852 FAM49AQ9H0Q0 323 aaPredicted RBP13.41□□□□□ -0.26
IRF9-211ENST00000560852 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
IRF9-211ENST00000560852 C2orf40Q9H1Z8 148 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 PRO3102Q9H379 93 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 FZD8Q9H461 694 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 CDHR5Q9HBB8 845 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 IL23AQ9NPF7 189 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 ARHGAP28Q9P2N2 729 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 AKT3Q9Y243 479 aa13.41□□□□□ -0.26
IRF9-211ENST00000560852 H0YCG3 227 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 GPR182O15218 404 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 VTNP04004 478 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 NPTX2P47972 431 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 NCKAP1LP55160 1127 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 FAM102BQ5T8I3 360 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 IFT74Q96LB3 600 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 PRIMPOLQ96LW4 560 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 PARVGQ9HBI0 331 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 GPRC5CQ9NQ84 441 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 TCHHQ07283 1943 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 ALPK3Q96L96 1907 aa13.4□□□□□ -0.26
IRF9-211ENST00000560852 LOXHD1Q8IVV2 1947 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 A0A087WZ62 844 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 GTPBP6O43824 516 aaPredicted RBP13.39□□□□□ -0.27
IRF9-211ENST00000560852 EFCAB14O75071 495 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 NR1I2O75469 434 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 LIG1P18858 919 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 AXLP30530 894 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 PHKA2P46019 1235 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 FPGSQ05932 587 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 AMHR2Q16671 573 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 KIZQ2M2Z5 673 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 NT5DC1Q5TFE4 455 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 UNC13DQ70J99 1090 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 RNF149Q8NC42 400 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 TMEM161BQ8NDZ6 487 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 CNNM3Q8NE01 707 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 BSNDQ8WZ55 320 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 BADQ92934 168 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 FDXACB1Q9BRP7 624 aaPredicted RBP13.39□□□□□ -0.27
IRF9-211ENST00000560852 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 PPP1R12CQ9BZL4 782 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 CCDC113Q9H0I3 377 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
IRF9-211ENST00000560852 ERVK-5Q9HDB9 667 aa13.39□□□□□ -0.27
IRF9-211ENST00000560852 ABHD14A-ACY1A0A1B0GW23 586 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 KLRC4O43908 158 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 PPP1R37O75864 691 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 BAIAP3O94812 1187 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
IRF9-211ENST00000560852 CSF2RAP15509 400 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 SARSP49591 514 aaKnown RBP13.38□□□□□ -0.27
IRF9-211ENST00000560852 SMTNP53814 917 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 CCL23P55773 120 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 FAM189BP81408 668 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 GTF2BQ00403 316 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 DPYDQ12882 1025 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 PSMD2Q13200 908 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 DMP1Q13316 513 aaPredicted RBP13.38□□□□□ -0.27
IRF9-211ENST00000560852 ALCAMQ13740 583 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 DSC3Q14574 896 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 KCNB1Q14721 858 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 CNKSR3Q6P9H4 555 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 ZNF720Q7Z2F6 126 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 KSR1Q8IVT5 923 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 CCDC65Q8IXS2 484 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 TMEM174Q8WUU8 243 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 HVCN1Q96D96 273 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 GTPBP4Q9BZE4 634 aaKnown RBP13.38□□□□□ -0.27
IRF9-211ENST00000560852 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 PRDM5Q9NQX1 630 aaPredicted RBP13.38□□□□□ -0.27
IRF9-211ENST00000560852 PADI3Q9ULW8 664 aa13.38□□□□□ -0.27
IRF9-211ENST00000560852 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
IRF9-211ENST00000560852 NPHP3-ACAD11A0A0J9YXS1 232 aa13.37□□□□□ -0.27
IRF9-211ENST00000560852 H0YGN5 161 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms