RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 SREBF1P36956 1147 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 SLC39A14Q15043 492 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 SHROOM1Q2M3G4 852 aaPredicted RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 CCDC50Q8IVM0 306 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 IL17RAQ96F46 866 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 A0A087WZ62 844 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 HSPA8P11142 646 aaKnown RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 NASPP49321 788 aaPredicted RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 GABPAQ06546 454 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 VWA3BQ502W6 1294 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 SCYL2Q6P3W7 929 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 PRPF31Q8WWY3 499 aaKnown RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 LENG1Q96BZ8 264 aaPredicted RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 ACSF2Q96CM8 615 aaPredicted RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 FDXACB1Q9BRP7 624 aaPredicted RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 RAB23Q9ULC3 237 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 CLIC4Q9Y696 253 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 LOC102724159A0A0B4J2E5 919 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 ARVCFO00192 962 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 PWP2Q15269 919 aaKnown RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 DCAF4L1Q3SXM0 396 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 TRIM60Q495X7 471 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 SDE2Q6IQ49 451 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 MLKLQ8NB16 471 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 SENP2Q9HC62 589 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 SEL1LQ9UBV2 794 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 LSM7Q9UK45 103 aaKnown RBP10.48□□□□□ -0.73
TRPM1-212ENST00000560801 RWDD3Q9Y3V2 267 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 BTAF1O14981 1849 aa10.48□□□□□ -0.73
TRPM1-212ENST00000560801 RPN1P04843 607 aaKnown RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 PFKFB1P16118 471 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 CAPN2P17655 700 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 MXI1P50539 228 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 ANTXR2P58335 489 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 MRPS6P82932 125 aaKnown RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 PTK2Q05397 1052 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 NR1H3Q13133 447 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 ZNF699Q32M78 642 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 CDR2LQ86X02 465 aaPredicted RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 SFR1Q86XK3 245 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 NME8Q8N427 588 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 ZNF830Q96NB3 372 aaPredicted RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 SRRTQ9BXP5 876 aaKnown RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 MORF4L1Q9UBU8 362 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 ZNF112Q9UJU3 913 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 CNTNAP5Q8WYK1 1306 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 A8MXQ7 604 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 MSH4O15457 936 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 GUCY1A2P33402 732 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 RBM23Q86U06 439 aaKnown RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 MNS1Q8NEH6 495 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 TRAPPC12Q8WVT3 735 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 PURBQ96QR8 312 aaKnown RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 FAM217BQ9NTX9 383 aaPredicted RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 THP07101 528 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 SP100P23497 879 aaPredicted RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 GRIK1P39086 918 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 BPIFB4P59827 614 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 EXOSC10Q01780 885 aaKnown RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 TOB2Q14106 344 aaPredicted RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 GBP6Q6ZN66 633 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 XXYLT1Q8NBI6 393 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 VPS16Q9H269 839 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 DBR1Q9UK59 544 aaKnown RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 RIPK3Q9Y572 518 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 DNM1LO00429 736 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 CYBBP04839 570 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 TMEM132DQ14C87 1099 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 USP38Q8NB14 1042 aa10.47□□□□□ -0.73
TRPM1-212ENST00000560801 AGO4Q9HCK5 861 aaKnown RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 RBAKQ9NYW8 714 aaPredicted RBP10.47□□□□□ -0.73
TRPM1-212ENST00000560801 GAS8O95995 478 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 POMCP01189 267 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 COL1A1P02452 1464 aaPredicted RBP10.46□□□□□ -0.73
TRPM1-212ENST00000560801 PRPHP41219 470 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 DUOXA2Q1HG44 320 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 TSGA10IPQ3SY00 556 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 RASGRP2Q7LDG7 609 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 SRGAP1Q7Z6B7 1085 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 CCDC42Q96M95 316 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 SYNRGQ9UMZ2 1314 aa10.46□□□□□ -0.73
TRPM1-212ENST00000560801 NEFHP12036 1026 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 PTGS1P23219 599 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 CMA1P23946 247 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 PCSK1P29120 753 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 CYLC1P35663 651 aaPredicted RBP10.46□□□□□ -0.74
TRPM1-212ENST00000560801 OLFML2BQ68BL8 750 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 BBS5Q8N3I7 341 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 AOPEPQ8N6M6 819 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 DDX12PQ92771 950 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 TNIP3Q96KP6 325 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 TEPSINQ96N21 525 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 ZIC5Q96T25 663 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 APOL5Q9BWW9 433 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 UNC45AQ9H3U1 944 aa10.46□□□□□ -0.74
TRPM1-212ENST00000560801 MRPL17Q9NRX2 175 aaKnown RBP10.46□□□□□ -0.74
TRPM1-212ENST00000560801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.46□□□□□ -0.74
TRPM1-212ENST00000560801 GSTTP1A0A1W2PQM5 241 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms