RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 EXOC7Q9UPT5 735 aa9.48□□□□□ -0.89
TRAF3-209ENST00000560463 CCDC169A6NNP5 214 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 GOLGA6L6A8MZA4 724 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 KCNJ18B7U540 433 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 CETN3O15182 167 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 ZEB2O60315 1214 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 PRPF6O94906 941 aaKnown RBP9.47□□□□□ -0.89
TRAF3-209ENST00000560463 F2P00734 622 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 TPM2P07951 284 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 ZNF286BP0CG31 522 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 RARBP10826 455 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 INSRRP14616 1297 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 HOXD13P35453 343 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 NAMPTP43490 491 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 NPTX2P47972 431 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 MARSP56192 900 aaKnown RBP9.47□□□□□ -0.89
TRAF3-209ENST00000560463 POU5F1BQ06416 359 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 MYBPC2Q14324 1141 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 KCNJ12Q14500 433 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 FSCN1Q16658 493 aaKnown RBP9.47□□□□□ -0.89
TRAF3-209ENST00000560463 MAP3K21Q5TCX8 1036 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 HS2ST1Q7LGA3 356 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 FILIP1Q7Z7B0 1213 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 NELFCDQ8IXH7 590 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 TMEM161BQ8NDZ6 487 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 ZNF296Q8WUU4 475 aaPredicted RBP9.47□□□□□ -0.89
TRAF3-209ENST00000560463 FGFBP2Q9BYJ0 223 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 XPO4Q9C0E2 1151 aaKnown RBP9.47□□□□□ -0.89
TRAF3-209ENST00000560463 POLR3FQ9H1D9 316 aaPredicted RBP9.47□□□□□ -0.89
TRAF3-209ENST00000560463 GPRC5CQ9NQ84 441 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 IFNKQ9P0W0 207 aa9.47□□□□□ -0.89
TRAF3-209ENST00000560463 MAGEC2Q9UBF1 373 aaPredicted RBP9.47□□□□□ -0.89
TRAF3-209ENST00000560463 A0A1B0GTH6 734 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 HAS3O00219 553 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 SLC16A4O15374 487 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 MSCO60682 206 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 PRKAR2AP13861 404 aaKnown RBP9.46□□□□□ -0.9
TRAF3-209ENST00000560463 PTGS1P23219 599 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 TMOD1P28289 359 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 CNGA1P29973 690 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 EFNA5P52803 228 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 CDC42EP1Q00587 391 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 CAP1Q01518 475 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 ADAM9Q13443 819 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 NR1I3Q14994 352 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 ZC2HC1CQ53FD0 456 aaPredicted RBP9.46□□□□□ -0.9
TRAF3-209ENST00000560463 APTXQ7Z2E3 356 aaKnown RBP9.46□□□□□ -0.9
TRAF3-209ENST00000560463 IRF2BP1Q8IU81 584 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 SLC9A9Q8IVB4 645 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 C12orf56Q8IXR9 622 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 SYCP3Q8IZU3 236 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 PSPC1Q8WXF1 523 aaKnown RBP9.46□□□□□ -0.9
TRAF3-209ENST00000560463 C2orf40Q9H1Z8 148 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 TMEM134Q9H6X4 195 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 ARHGAP28Q9P2N2 729 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 TBX20Q9UMR3 447 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 NRCAMQ92823 1304 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 ZMYM2Q9UBW7 1377 aa9.46□□□□□ -0.9
TRAF3-209ENST00000560463 TDRD15B5MCY1 1934 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 DENND3A2RUS2 1198 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 K7ERI5 159 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 SLC16A3O15427 465 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 TGFB1I1O43294 461 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 C22orf31O95567 290 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 C6orf222P0C671 652 aaPredicted RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 ELNP15502 786 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 GLRA2P23416 452 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 NR2F2P24468 414 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 KLRC1P26715 233 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 CST5P28325 142 aaPredicted RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 MTIF2P46199 727 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 PSEN2P49810 448 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 COPB1P53618 953 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 SOX10P56693 466 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 C1QTNF8P60827 252 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 PPP2R3AQ06190 1150 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 PPFIA1Q13136 1202 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 TFDP1Q14186 410 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 HSP90AA2PQ14568 343 aaPredicted RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 MFSD10Q14728 455 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 KRT31Q15323 416 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 GRIK4Q16099 956 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 KIAA0753Q2KHM9 967 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 HSP90AA4PQ58FG1 418 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 EFCAB12Q6NXP0 572 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 LRRC55Q6ZSA7 311 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 FRMD5Q7Z6J6 570 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 DRC7Q8IY82 874 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 LINC01465Q8N7H1 131 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 PCSK9Q8NBP7 692 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 PRPF31Q8WWY3 499 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 BSNDQ8WZ55 320 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 KAT2BQ92831 832 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 TMEM143Q96AN5 459 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 CNOT6LQ96LI5 555 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 TUBGCP2Q9BSJ2 902 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 MKNK1Q9BUB5 465 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms