RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 UBE4BO95155 1302 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 PHLPP2Q6ZVD8 1323 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 SYNRGQ9UMZ2 1314 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 CCDC169A6NNP5 214 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 SFI1A8K8P3 1242 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 PPP1R3GB7ZBB8 358 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 ASAP2O43150 1006 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 CALUO43852 315 aaPredicted RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 MAFO75444 373 aaPredicted RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 GCNT3O95395 438 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 TFRCP02786 760 aaKnown RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 TPM3P06753 285 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 TPM2P07951 284 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 EN2P19622 333 aaPredicted RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 ATP4AP20648 1035 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 CCNE1P24864 410 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 MARK3P27448 753 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 CCND3P30281 292 aaPredicted RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 CDC42EP1Q00587 391 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 LRRC63Q05C16 580 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 PTPN11Q06124 597 aaPredicted RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 SPAG1Q07617 926 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 EHHADHQ08426 723 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 TRIM32Q13049 653 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 MXD4Q14582 209 aaPredicted RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 EMC2Q15006 297 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 IQCB1Q15051 598 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 TARBP2Q15633 366 aaKnown RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 GNASQ5JWF2 1037 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 SPATA1Q5VX52 437 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 IER5Q5VY09 327 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 FOXR2Q6PJQ5 311 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 ANKRD33Q7Z3H0 272 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 LUZP1Q86V48 1076 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 SESTD1Q86VW0 696 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 FAM114A1Q8IWE2 563 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 SLC43A3Q8NBI5 491 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 GOLGA5Q8TBA6 731 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 NOC3LQ8WTT2 800 aaKnown RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 SPIRE2Q8WWL2 714 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 PSPC1Q8WXF1 523 aaKnown RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 P2RX5Q93086 422 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 HVCN1Q96D96 273 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 NTPCRQ9BSD7 190 aaKnown RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 DHX33Q9H6R0 707 aaKnown RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 TMEM206Q9H813 350 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 XPNPEP3Q9NQH7 507 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 TBC1D7Q9P0N9 293 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 MAGEC2Q9UBF1 373 aaPredicted RBP7.09□□□□□ -1.27
SPG11-221ENST00000560299 CTNND2Q9UQB3 1225 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 MAPK8IP1Q9UQF2 711 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 TELO2Q9Y4R8 837 aa7.09□□□□□ -1.27
SPG11-221ENST00000560299 FRMPD3Q5JV73 1810 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 MROH7Q68CQ1 1323 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 NRCAMQ92823 1304 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 A0A1W2PPC1 479 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 TMEM150BA6NC51 233 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 RSPH10B2B2RC85 870 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 KBTBD13C9JR72 458 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 K7ENM7 598 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 RPLP2P05387 115 aaKnown RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 MYL3P08590 195 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 RSPH10BP0C881 870 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 ZNF286BP0CG31 522 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 INSRRP14616 1297 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 RPL13P26373 211 aaKnown RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 CDK7P50613 346 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 PEX3P56589 373 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 STX17P56962 302 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 SNRPFP62306 86 aaKnown RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 PPFIA1Q13136 1202 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 TFDP1Q14186 410 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 HSP90AA2PQ14568 343 aaPredicted RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 MFSD10Q14728 455 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 LRRC41Q15345 812 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 KNOP1Q1ED39 458 aaKnown RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 TMEM63BQ5T3F8 832 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 CENPPQ6IPU0 288 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 EFCAB12Q6NXP0 572 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 HS2ST1Q7LGA3 356 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 ZNF720Q7Z2F6 126 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 TRIM50Q86XT4 487 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 DHX40Q8IX18 779 aaKnown RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 SMYD4Q8IYR2 804 aaPredicted RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 SYCP3Q8IZU3 236 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 ZNF710Q8N1W2 664 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 CSGALNACT2Q8N6G5 542 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 KIAA0895Q8NCT3 520 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 ZNF507Q8TCN5 953 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 ACCSQ96QU6 501 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 CTAGE1Q96RT6 745 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 SH2D3AQ9BRG2 576 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 C16orf70Q9BSU1 422 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 MTG1Q9BT17 334 aaPredicted RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 POLR3FQ9H1D9 316 aaPredicted RBP7.08□□□□□ -1.28
SPG11-221ENST00000560299 RNPEPQ9H4A4 650 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 ST6GALNAC4Q9H4F1 302 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 THAP9Q9H5L6 903 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 C11orf49Q9H6J7 331 aa7.08□□□□□ -1.28
SPG11-221ENST00000560299 SUGCTQ9HAC7 445 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms