RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.92□□□□□ -0.66
LRRC28-216ENST00000559819 MKNK1Q9BUB5 465 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 CELF4Q9BZC1 486 aaKnown RBP10.92□□□□□ -0.66
LRRC28-216ENST00000559819 EHMT1Q9H9B1 1298 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 CCPG1Q9ULG6 757 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 ODF2LQ9ULJ1 636 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 PPP1R9AQ9ULJ8 1098 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 SYNPO2Q9UMS6 1093 aa10.92□□□□□ -0.66
LRRC28-216ENST00000559819 COL4A5P29400 1685 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 SART1O43290 800 aaKnown RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 COPB2P35606 906 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 CAP2P40123 477 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 BFSP1Q12934 665 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 ADAT2Q7Z6V5 191 aaKnown RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 ARHGEF19Q8IW93 802 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 SYT11Q9BT88 431 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 TAF1DQ9H5J8 278 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 HOMER2Q9NSB8 354 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 SUCLA2Q9P2R7 463 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 SEL1LQ9UBV2 794 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 AMACRQ9UHK6 382 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 NR2E1Q9Y466 385 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 ZNF536O15090 1300 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 UBE4BO95155 1302 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 A0A0A6YYK5 440 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 FOXN3O00409 490 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 PPP1R37O75864 691 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 GUCY2CP25092 1073 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 ANXA13P27216 316 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 FLT3P36888 993 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 SETQ01105 290 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 SPP2Q13103 211 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 ITGB3BPQ13352 177 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 CPXCR1Q8N123 301 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 LARGE2Q8N3Y3 721 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 SUPT20HQ8NEM7 779 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 OR2W6PQ8NHA6 318 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 GMLQ99445 158 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 CBWD1Q9BRT8 395 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 STRA6Q9BX79 667 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 THAP2Q9H0W7 228 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 ISCUQ9H1K1 167 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 KCNH7Q9NS40 1196 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 APEX2Q9UBZ4 518 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 CHORDC1Q9UHD1 332 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-216ENST00000559819 PLAAQ9Y263 795 aa10.91□□□□□ -0.66
LRRC28-216ENST00000559819 EMSYQ7Z589 1322 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 TTI1O43156 1089 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 LMNB1P20700 586 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 TNFAIP3P21580 790 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 CCT5P48643 541 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 PPP3CAQ08209 521 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 TRAF1Q13077 416 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 PRPF4BQ13523 1007 aaKnown RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 DCAF12L1Q5VU92 463 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 STXBP4Q6ZWJ1 553 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 MAATS1Q7Z4T9 603 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 FAM160B2Q86V87 743 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 RASGEF1CQ8N431 466 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 MREGQ8N565 214 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 LMO3Q8TAP4 145 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 PLEKHO2Q8TD55 490 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 WHAMMQ8TF30 809 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 KAT5Q92993 513 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 HES6Q96HZ4 224 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 ZNF341Q9BYN7 854 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 PDGFDQ9GZP0 370 aaPredicted RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 GPRC5CQ9NQ84 441 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 FEM1BQ9UK73 627 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 AMFRQ9UKV5 643 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 COG5Q9UP83 839 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 SAMM50Q9Y512 469 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 EIF3HO15372 352 aaKnown RBP eCLIP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 DDX3YO15523 660 aaKnown RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 DHX15O43143 795 aaKnown RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 HSPA9P38646 679 aaKnown RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 PTGER2P43116 358 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 GCLMP48507 274 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 ZNF211Q13398 564 aaPredicted RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 UAP1Q16222 522 aaPredicted RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 LMBR1Q8WVP7 490 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 CTNNBL1Q8WYA6 563 aaPredicted RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 RFFLQ8WZ73 363 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 RNPC3Q96LT9 517 aaKnown RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 DPH5Q9H2P9 285 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 UBE2TQ9NPD8 197 aaPredicted RBP10.9□□□□□ -0.66
LRRC28-216ENST00000559819 INTUQ9ULD6 942 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 ZHX2Q9Y6X8 837 aa10.9□□□□□ -0.66
LRRC28-216ENST00000559819 NCANO14594 1321 aa10.9□□□□□ -0.67
LRRC28-216ENST00000559819 DAPK3O43293 454 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 FGGP02679 453 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 TMEM253P0C7T8 217 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 HSD17B3P37058 310 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 PPATQ06203 517 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 PPP2R5AQ15172 486 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 UGCGQ16739 394 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 CEP85LQ5SZL2 805 aa10.89□□□□□ -0.67
LRRC28-216ENST00000559819 ZNF746Q6NUN9 644 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms