RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 PRELPP51888 382 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 PTENP60484 403 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 MYL7Q01449 175 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 DHX9Q08211 1270 aaKnown RBP17.98■□□□□ 0.47
SPG11-215ENST00000559193 STRIP1Q5VSL9 837 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 MMS22LQ6ZRQ5 1243 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 OTUD6BQ8N6M0 293 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 BANK1Q8NDB2 785 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 THAP2Q9H0W7 228 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 PPANQ9NQ55 473 aaKnown RBP17.98■□□□□ 0.47
SPG11-215ENST00000559193 COG5Q9UP83 839 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 FRMD4BQ9Y2L6 1034 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 FNTAP49354 379 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 UBXN2AP68543 259 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 PPP2R5AQ15172 486 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 MICALCLQ6ZW33 695 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 YTHDF3Q7Z739 585 aaKnown RBP17.98■□□□□ 0.47
SPG11-215ENST00000559193 TRIM31Q9BZY9 425 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 CARD9Q9H257 536 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 ERVK-5Q9HDB9 667 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 BCCIPQ9P287 314 aaKnown RBP eCLIP17.98■□□□□ 0.47
SPG11-215ENST00000559193 CNOT8Q9UFF9 292 aaKnown RBP17.98■□□□□ 0.47
SPG11-215ENST00000559193 SCN9AQ15858 1988 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 ATRNL1Q5VV63 1379 aa17.98■□□□□ 0.47
SPG11-215ENST00000559193 DCDC2CA8MYV0 355 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 ONECUT3O60422 494 aaPredicted RBP17.97■□□□□ 0.47
SPG11-215ENST00000559193 GAS7O60861 476 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 COPB2P35606 906 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 PRPF4BQ13523 1007 aaKnown RBP17.97■□□□□ 0.47
SPG11-215ENST00000559193 ARHGAP44Q17R89 818 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 KIAA1755Q5JYT7 1200 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 ODR4Q5SWX8 454 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 RBM26Q5T8P6 1007 aaKnown RBP17.97■□□□□ 0.47
SPG11-215ENST00000559193 PHLDB3Q6NSJ2 640 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 TXLNGYQ9BZA5 131 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 DIS3Q9Y2L1 958 aaKnown RBP17.97■□□□□ 0.47
SPG11-215ENST00000559193 CAPN7Q9Y6W3 813 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 ZNF646O15015 1829 aaPredicted RBP17.97■□□□□ 0.47
SPG11-215ENST00000559193 FSBPO95073 299 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 TMOD1P28289 359 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 KIF22Q14807 665 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 KCNV1Q6PIU1 500 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 ADAT2Q7Z6V5 191 aaKnown RBP17.97■□□□□ 0.47
SPG11-215ENST00000559193 CNPY4Q8N129 248 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 CYFIP2Q96F07 1278 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 UNC45AQ9H3U1 944 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 NOVA2Q9UNW9 492 aaKnown RBP17.97■□□□□ 0.47
SPG11-215ENST00000559193 EP400Q96L91 3159 aa17.97■□□□□ 0.47
SPG11-215ENST00000559193 LRRN2O75325 713 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 PPFIA2O75334 1257 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 TNFAIP3P21580 790 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 ECE1P42892 770 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 STAT2P52630 851 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.47
SPG11-215ENST00000559193 PPP2R2AP63151 447 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 BFSP1Q12934 665 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 ZNF211Q13398 564 aaPredicted RBP17.96■□□□□ 0.47
SPG11-215ENST00000559193 SUGP1Q8IWZ8 645 aaKnown RBP17.96■□□□□ 0.47
SPG11-215ENST00000559193 LMO3Q8TAP4 145 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 ALG3Q92685 438 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 TDRD3Q9H7E2 651 aaKnown RBP17.96■□□□□ 0.47
SPG11-215ENST00000559193 SEPT11Q9NVA2 429 aaKnown RBP17.96■□□□□ 0.47
SPG11-215ENST00000559193 ODF2LQ9ULJ1 636 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 SLX4Q8IY92 1834 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 ANKRD62A6NC57 917 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 ECE2O60344 883 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 DUPD1Q68J44 220 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 STXBP4Q6ZWJ1 553 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 NACC1Q96RE7 527 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 FMO2Q99518 471 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 STRA6Q9BX79 667 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 RAB17Q9H0T7 212 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 GGA2Q9UJY4 613 aa17.96■□□□□ 0.47
SPG11-215ENST00000559193 FOXN3O00409 490 aaPredicted RBP17.95■□□□□ 0.46
SPG11-215ENST00000559193 TRAPPC3O43617 180 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 CCDC172P0C7W6 258 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 DR1Q01658 176 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 MAPK7Q13164 816 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 KRT71Q3SY84 523 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 PRPF38AQ8NAV1 312 aaKnown RBP17.95■□□□□ 0.46
SPG11-215ENST00000559193 SLC20A1Q8WUM9 679 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
SPG11-215ENST00000559193 ZDHHC18Q9NUE0 388 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 SERPINA10Q9UK55 444 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 EXOC3O60645 756 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 POLR2MP0CAP2 368 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 MAGOHP61326 146 aaKnown RBP17.95■□□□□ 0.46
SPG11-215ENST00000559193 CCDC174Q6PII3 467 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 C6orf89Q6UWU4 347 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 SLC9A9Q8IVB4 645 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 FMNL3Q8IVF7 1028 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 DAW1Q8N136 415 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 MAGOHBQ96A72 148 aaKnown RBP17.95■□□□□ 0.46
SPG11-215ENST00000559193 HOOK2Q96ED9 719 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 KCND2Q9NZV8 630 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 ATP8A1Q9Y2Q0 1164 aa17.95■□□□□ 0.46
SPG11-215ENST00000559193 ARP10275 920 aa17.94■□□□□ 0.46
SPG11-215ENST00000559193 VCAM1P19320 739 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms