RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 COG5Q9UP83 839 aa12.54□□□□□ -0.4
BMP4-204ENST00000558961 COL4A3BPQ9Y5P4 624 aa12.54□□□□□ -0.4
BMP4-204ENST00000558961 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 A0A0U1RQF3 1178 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 DLL1O00548 723 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 HOXA2O43364 376 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 DGAT1O75907 488 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
BMP4-204ENST00000558961 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
BMP4-204ENST00000558961 MUTP22033 750 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 RARRES1P49788 294 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 GATMP50440 423 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
BMP4-204ENST00000558961 MRPS5P82675 430 aaKnown RBP12.53□□□□□ -0.4
BMP4-204ENST00000558961 POU5F1BQ06416 359 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
BMP4-204ENST00000558961 XKR9Q5GH70 373 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 ZNF598Q86UK7 904 aaKnown RBP12.53□□□□□ -0.4
BMP4-204ENST00000558961 FERMT3Q86UX7 667 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 CATSPER3Q86XQ3 398 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
BMP4-204ENST00000558961 KSR1Q8IVT5 923 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 RSPH1Q8WYR4 309 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 SYMPKQ92797 1274 aaKnown RBP12.53□□□□□ -0.4
BMP4-204ENST00000558961 NLRP4Q96MN2 994 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 MTRQ99707 1265 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 POLR3CQ9BUI4 534 aaPredicted RBP12.53□□□□□ -0.4
BMP4-204ENST00000558961 AGPAT5Q9NUQ2 364 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 DACT1Q9NYF0 836 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 CHMP5Q9NZZ3 219 aa12.53□□□□□ -0.4
BMP4-204ENST00000558961 LAD1O00515 517 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 ASAP2O43150 1006 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 MED24O75448 989 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 CSDE1O75534 798 aaKnown RBP12.52□□□□□ -0.41
BMP4-204ENST00000558961 EOMESO95936 686 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 FGFR1P11362 822 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 ATP2B1P20020 1258 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 FGFR4P22455 802 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 RPA1P27694 616 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 GJB2P29033 226 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 LAMTOR4Q0VGL1 99 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 MXD4Q14582 209 aaPredicted RBP12.52□□□□□ -0.41
BMP4-204ENST00000558961 NBR1Q14596 966 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.41
BMP4-204ENST00000558961 ZNF174Q15697 407 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 PAN2Q504Q3 1202 aaKnown RBP12.52□□□□□ -0.41
BMP4-204ENST00000558961 FAM102BQ5T8I3 360 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 SRGAP1Q7Z6B7 1085 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 IGSF22Q8N9C0 903 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 PRPF31Q8WWY3 499 aaKnown RBP12.52□□□□□ -0.41
BMP4-204ENST00000558961 TMEM143Q96AN5 459 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 DBR1Q9UK59 544 aaKnown RBP12.52□□□□□ -0.41
BMP4-204ENST00000558961 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 PCDHB6Q9Y5E3 794 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 VCANP13611 3396 aa12.52□□□□□ -0.41
BMP4-204ENST00000558961 BRWD1Q9NSI6 2320 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.51□□□□□ -0.41
BMP4-204ENST00000558961 GRM6O15303 877 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 PRPHP41219 470 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 TECP42680 631 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 CAMK1Q14012 370 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 AAK1Q2M2I8 961 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 RILPL1Q5EBL4 403 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 CLLU1OSQ5K130 101 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 HAUS3Q68CZ6 603 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 ERMNQ8TAM6 284 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 PIGOQ8TEQ8 1089 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 HLA-CQ95604 372 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 CASD1Q96PB1 797 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 NFKBIZQ9BYH8 718 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 NSUN3Q9H649 340 aaKnown RBP12.51□□□□□ -0.41
BMP4-204ENST00000558961 CWH43Q9H720 699 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 MINDY3Q9H8M7 445 aa12.51□□□□□ -0.41
BMP4-204ENST00000558961 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
BMP4-204ENST00000558961 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.51□□□□□ -0.41
BMP4-204ENST00000558961 SPTBN5Q9NRC6 3674 aaKnown RBP12.51□□□□□ -0.41
BMP4-204ENST00000558961 TBKBP1A7MCY6 615 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 ZNF623O75123 536 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 ITGB1P05556 798 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 SKIP12755 728 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 ARL2P36404 184 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 PHKA2P46019 1235 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 RAB27AP51159 221 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 PTENP60484 403 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 TFF2Q03403 129 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 UBE3AQ05086 875 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 PTGDRQ13258 359 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 PDIA5Q14554 519 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 SKIV2LQ15477 1246 aaKnown RBP12.5□□□□□ -0.41
BMP4-204ENST00000558961 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 POTEGQ6S5H5 508 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 CLEC17AQ6ZS10 378 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 RNF149Q8NC42 400 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 SPPL3Q8TCT6 385 aa12.5□□□□□ -0.41
BMP4-204ENST00000558961 UBE2ZQ9H832 354 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms