RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CCDC169A6NNP5 214 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 GCNT3O95395 438 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 MYBP10242 640 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 PPP1R2P41236 205 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 NAMPTP43490 491 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 ZNF165P49910 485 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 STIM1Q13586 685 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 FAM47CQ5HY64 1035 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 GDF6Q6KF10 455 aaPredicted RBP19.94■□□□□ 0.78
CLPX-203ENST00000558958 MYOCDQ8IZQ8 938 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 MCOLN1Q9GZU1 580 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 KMT5AQ9NQR1 393 aa19.94■□□□□ 0.78
CLPX-203ENST00000558958 K7ENM7 598 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 EIF3DO15371 548 aaKnown RBP eCLIP19.93■□□□□ 0.78
CLPX-203ENST00000558958 SLC16A4O15374 487 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 ASAP2O43150 1006 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 PPP1R37O75864 691 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 TFRCP02786 760 aaKnown RBP19.93■□□□□ 0.78
CLPX-203ENST00000558958 CYP2C9P11712 490 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 ERCC5P28715 1186 aaPredicted RBP19.93■□□□□ 0.78
CLPX-203ENST00000558958 PTPN11Q06124 597 aaPredicted RBP19.93■□□□□ 0.78
CLPX-203ENST00000558958 CAPSQ13938 189 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 BMT2Q1RMZ1 405 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 KLHL10Q6JEL2 608 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 RUFY4Q6ZNE9 571 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 HAUS6Q7Z4H7 955 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 SLC43A3Q8NBI5 491 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 TMEM161BQ8NDZ6 487 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 ZNF507Q8TCN5 953 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 MAP7D2Q96T17 732 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 BPIFA3Q9BQP9 254 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 STARD7Q9NQZ5 370 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 PCDHB13Q9Y5F0 798 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 EVPLQ92817 2033 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 ADGRA3Q8IWK6 1321 aa19.93■□□□□ 0.78
CLPX-203ENST00000558958 PSMA7O14818 248 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 KIF20AO95235 890 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 GJA8P48165 433 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 MNX1P50219 401 aaPredicted RBP19.92■□□□□ 0.78
CLPX-203ENST00000558958 ALCAMQ13740 583 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 ZC2HC1CQ53FD0 456 aaPredicted RBP19.92■□□□□ 0.78
CLPX-203ENST00000558958 STXBP4Q6ZWJ1 553 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 RHPN2Q8IUC4 686 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 KSR1Q8IVT5 923 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 FAM200AQ8TCP9 573 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 DHTKD1Q96HY7 919 aaPredicted RBP19.92■□□□□ 0.78
CLPX-203ENST00000558958 KIFC3Q9BVG8 833 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 ARHGAP28Q9P2N2 729 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 AKT3Q9Y243 479 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 A0A0U1RQG5 324 aaPredicted RBP19.92■□□□□ 0.78
CLPX-203ENST00000558958 LRRIQ4A6NIV6 560 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 PRPF6O94906 941 aaKnown RBP19.92■□□□□ 0.78
CLPX-203ENST00000558958 HOXD13P35453 343 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 GTF2BQ00403 316 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 PAK1Q13153 545 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 DEPTORQ8TB45 409 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 NELFBQ8WX92 580 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 KCNN1Q92952 543 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 MED15Q96RN5 788 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 CTAGE1Q96RT6 745 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 CBX8Q9HC52 389 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 CTNND2Q9UQB3 1225 aa19.92■□□□□ 0.78
CLPX-203ENST00000558958 UBE4BO95155 1302 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 H0YCG3 227 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 VTNP04004 478 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 SRGAP2CP0DJJ0 459 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 SCP2P22307 547 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 POU5F1BQ06416 359 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 TFDP1Q14186 410 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 IQCB1Q15051 598 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 CENPPQ6IPU0 288 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 TAF2Q6P1X5 1199 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 RNF149Q8NC42 400 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 SEZ6LQ9BYH1 1024 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 FAM49AQ9H0Q0 323 aaPredicted RBP19.91■□□□□ 0.78
CLPX-203ENST00000558958 RBSNQ9H1K0 784 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 RWDD2AQ9UIY3 292 aa19.91■□□□□ 0.78
CLPX-203ENST00000558958 TRIP12Q14669 1992 aaPredicted RBP19.91■□□□□ 0.78
CLPX-203ENST00000558958 DENND3A2RUS2 1198 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 ARVCFO00192 962 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 CCNE1P24864 410 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 ABCD1P33897 745 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 KCNA1Q09470 495 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 L1TD1Q5T7N2 865 aaKnown RBP19.9■□□□□ 0.78
CLPX-203ENST00000558958 CDCA2Q69YH5 1023 aaPredicted RBP19.9■□□□□ 0.78
CLPX-203ENST00000558958 SERINC5Q86VE9 423 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 NELFCDQ8IXH7 590 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 DNAJB3Q8WWF6 145 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 P2RX5Q93086 422 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 HVCN1Q96D96 273 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 KCTD10Q9H3F6 313 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 SEMA6BQ9H3T3 888 aa19.9■□□□□ 0.78
CLPX-203ENST00000558958 CDK7P50613 346 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 PMS1P54277 932 aaKnown RBP19.89■□□□□ 0.77
CLPX-203ENST00000558958 STX17P56962 302 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 CDC42EP1Q00587 391 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 PTGISQ16647 500 aa19.89■□□□□ 0.77
CLPX-203ENST00000558958 KNOP1Q1ED39 458 aaKnown RBP19.89■□□□□ 0.77
CLPX-203ENST00000558958 DHX40Q8IX18 779 aaKnown RBP19.89■□□□□ 0.77
CLPX-203ENST00000558958 NME8Q8N427 588 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms