RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 COL4A3BPQ9Y5P4 624 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 MUC3AQ02505 3323 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 VWA3AA6NCI4 1184 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 STX6O43752 255 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 USO1O60763 962 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 SRGAP2CP0DJJ0 459 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 FGFR1P11362 822 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 RFC5P40937 340 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 POLGP54098 1239 aaPredicted RBP14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 TMEM119Q4V9L6 283 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 CLLU1OSQ5K130 101 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 SPECC1Q5M775 1068 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 MAEAQ7L5Y9 396 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 NLRP4Q96MN2 994 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 PLIN2Q99541 437 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 MTRQ99707 1265 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 RUSC1Q9BVN2 902 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 CXCL16Q9H2A7 254 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 BLOC1S4Q9NUP1 217 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 DDX19AQ9NUU7 478 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 MTUS1Q9ULD2 1270 aa14.09□□□□□ -0.15
RABGGTA-207ENST00000558936 A0A087X0B3 334 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 M0QZ92 97 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 FOSL2P15408 326 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 POU3F3P20264 500 aaPredicted RBP14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 TMOD1P28289 359 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 CCT6AP40227 531 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 SARSP49591 514 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 PTENP60484 403 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 MBTD1Q05BQ5 628 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 ARSHQ5FYA8 562 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 PADI6Q6TGC4 694 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 DTHD1Q6ZMT9 781 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 C1orf186Q6ZWK4 172 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 OTUD6AQ7L8S5 288 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 BRAPQ7Z569 592 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 ZNF410Q86VK4 478 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 RNF149Q8NC42 400 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 SNX29Q8TEQ0 813 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 GDPD5Q8WTR4 605 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 NLRP7Q8WX94 980 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 ARNTL2Q8WYA1 636 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 MAP7D2Q96T17 732 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 BHMT2Q9H2M3 363 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 KIF3AQ9Y496 699 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 INSL6Q9Y581 213 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 MTCH2Q9Y6C9 303 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 MRPL42Q9Y6G3 142 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 MYH11P35749 1972 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 TRIP11Q15643 1979 aa14.08□□□□□ -0.16
RABGGTA-207ENST00000558936 LAD1O00515 517 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 GPR182O15218 404 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 B4GALT5O43286 388 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 DGAT1O75907 488 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 CYP11B2P19099 503 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 DNAJB1P25685 340 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 MARCKSP29966 332 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 SLC12A3P55017 1021 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 EPC2Q52LR7 807 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 NAALADL2Q58DX5 795 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 ARL6IP4Q66PJ3 421 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 TAS1R3Q7RTX0 852 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 ECHDC2Q86YB7 292 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 SLC7A3Q8WY07 619 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 CLP1Q92989 425 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 LPPQ93052 612 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 EPSTI1Q96J88 318 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 CASD1Q96PB1 797 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 NACC1Q96RE7 527 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 KIFC3Q9BVG8 833 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 FTHL17Q9BXU8 183 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 POLR3FQ9H1D9 316 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 CWH43Q9H720 699 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 PPME1Q9Y570 386 aa14.07□□□□□ -0.16
RABGGTA-207ENST00000558936 BRWD1Q9NSI6 2320 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 NPHP3-ACAD11A0A0J9YXS1 232 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 TSPAN1O60635 241 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 DKC1O60832 514 aaKnown RBP eCLIP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 MUTP22033 750 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 CEBPZQ03701 1054 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 LONRF3Q496Y0 759 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 PAN2Q504Q3 1202 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 RINT1Q6NUQ1 792 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 CDR2LQ86X02 465 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 NPAS4Q8IUM7 802 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 SMG8Q8ND04 991 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 MAFAQ8NHW3 353 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 PSPC1Q8WXF1 523 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 TRAIPQ9BWF2 469 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 EIF2AQ9BY44 585 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 GCOM2Q9BZD3 368 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 CCDC113Q9H0I3 377 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 CSRNP2Q9H175 543 aa14.06□□□□□ -0.16
RABGGTA-207ENST00000558936 ATP6V0A4Q9HBG4 840 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms