RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 SH3BP1Q9Y3L3 701 aa13.14□□□□□ -0.31
SEC11A-206ENST00000558924 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
SEC11A-206ENST00000558924 CALUO43852 315 aaPredicted RBP13.13□□□□□ -0.31
SEC11A-206ENST00000558924 PTGISQ16647 500 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 KNOP1Q1ED39 458 aaKnown RBP13.13□□□□□ -0.31
SEC11A-206ENST00000558924 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
SEC11A-206ENST00000558924 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 ALS2CLQ60I27 953 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
SEC11A-206ENST00000558924 ABCA3Q99758 1704 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 FLOT1O75955 427 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 ARP10275 920 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 HSD17B3P37058 310 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 RRP1BQ14684 758 aaKnown RBP13.13□□□□□ -0.31
SEC11A-206ENST00000558924 AADACL2Q6P093 401 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 ARFGAP2Q8N6H7 521 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 LMBR1Q8WVP7 490 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 BICD1Q96G01 975 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 G3BP2Q9UN86 482 aaKnown RBP13.13□□□□□ -0.31
SEC11A-206ENST00000558924 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 FOXO6A8MYZ6 492 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 EDIL3O43854 480 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 MTM1Q13496 603 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 ARSHQ5FYA8 562 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 GKAP1Q5VSY0 366 aaPredicted RBP13.13□□□□□ -0.31
SEC11A-206ENST00000558924 TRIM68Q6AZZ1 485 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 PPP1R18Q6NYC8 613 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 KIF2BQ8N4N8 673 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
SEC11A-206ENST00000558924 SERPING1P05155 500 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 DLATP10515 647 aaKnown RBP13.12□□□□□ -0.31
SEC11A-206ENST00000558924 GCLMP48507 274 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 ERVK-9P63128 1117 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 PPP4R3AQ6IN85 833 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 HHIPL2Q6UWX4 724 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 MIER3Q7Z3K6 550 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 PPM1KQ8N3J5 372 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 CYFIP2Q96F07 1278 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 FAM118BQ9BPY3 351 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 OSGEPQ9NPF4 335 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 NOC2LQ9Y3T9 749 aaKnown RBP13.12□□□□□ -0.31
SEC11A-206ENST00000558924 GOLGA6L10A0A0M3HER8 536 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 ACSL3O95573 720 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
SEC11A-206ENST00000558924 GIT2Q14161 759 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 C11orf91Q3C1V1 193 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 SLC27A3Q5K4L6 730 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 FAM102BQ5T8I3 360 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 MMGT1Q8N4V1 131 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 ACP6Q9NPH0 428 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 COL16A1Q07092 1604 aaPredicted RBP13.12□□□□□ -0.31
SEC11A-206ENST00000558924 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 UCHL3P15374 230 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 TNFAIP3P21580 790 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 FGFR4P22455 802 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 STAT1P42224 750 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 SOX10P56693 466 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 MESDQ14696 234 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 LRRC45Q96CN5 670 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 GPRC5CQ9NQ84 441 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 CEP72Q9P209 647 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 DBR1Q9UK59 544 aaKnown RBP13.12□□□□□ -0.31
SEC11A-206ENST00000558924 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
SEC11A-206ENST00000558924 IRS2Q9Y4H2 1338 aa13.12□□□□□ -0.31
SEC11A-206ENST00000558924 TLR2O60603 784 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 H2AFZP0C0S5 128 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 POLD1P28340 1107 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 AP1ARQ63HQ0 302 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 TLDC1Q6P9B6 456 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 H2AFVQ71UI9 128 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 RGS16O15492 202 aaPredicted RBP13.11□□□□□ -0.31
SEC11A-206ENST00000558924 KCNJ1P48048 391 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 PSMD2Q13200 908 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 MEA1Q16626 185 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 STRIP1Q5VSL9 837 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 ZNF668Q96K58 619 aaPredicted RBP13.11□□□□□ -0.31
SEC11A-206ENST00000558924 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 GRIK3Q13003 919 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 LMBRD2Q68DH5 695 aaPredicted RBP13.11□□□□□ -0.31
SEC11A-206ENST00000558924 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
SEC11A-206ENST00000558924 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 BORCS6Q96GS4 357 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 ZDHHC15Q96MV8 337 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 LXNQ9BS40 222 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 TTYH3Q9C0H2 523 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
SEC11A-206ENST00000558924 PARVGQ9HBI0 331 aa13.11□□□□□ -0.31
SEC11A-206ENST00000558924 ECM29Q5VYK3 1845 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 PGRMC1O00264 195 aaKnown RBP13.1□□□□□ -0.31
SEC11A-206ENST00000558924 ATMINO43313 823 aaPredicted RBP13.1□□□□□ -0.31
SEC11A-206ENST00000558924 CALCAP01258 141 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 NPEPPSP55786 919 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 TNIP1Q15025 636 aa13.1□□□□□ -0.31
SEC11A-206ENST00000558924 GRIPAP1Q4V328 841 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms