RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 HDAC9Q9UKV0 1011 aa5.18□□□□□ -1.58
SPG11-211ENST00000558561 GPR55Q9Y2T6 319 aaPredicted RBP5.18□□□□□ -1.58
SPG11-211ENST00000558561 ZNF609O15014 1411 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 A0A1W2PQU0 124 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 DDTLA6NHG4 134 aaPredicted RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 STXBP3O00186 592 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 TBC1D8O95759 1140 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 MAP4K4O95819 1239 aaPredicted RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 HSPA8P11142 646 aaKnown RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 GRIA2P42262 883 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 NOP2P46087 812 aaKnown RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 RHBDL3P58872 404 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 AMPD2Q01433 879 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 SLC4A8Q2Y0W8 1093 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 GORABQ5T7V8 394 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 GTF2IRD2BQ6EKJ0 949 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 HHIPL2Q6UWX4 724 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 CBLL1Q75N03 491 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 DPH6Q7L8W6 267 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 GTF2IRD2Q86UP8 949 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 AACSQ86V21 672 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 RASAL3Q86YV0 1011 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 TRIM59Q8IWR1 403 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 RPAP2Q8IXW5 612 aaPredicted RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 C2orf69Q8N8R5 385 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 SPATA5Q8NB90 893 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 TMEM52Q8NDY8 209 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 ST13P5Q8NFI4 369 aaPredicted RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 WDR66Q8TBY9 1149 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 BTN2A2Q8WVV5 523 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 LINC01599Q8WXQ3 324 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 ZKSCAN4Q969J2 545 aaPredicted RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 NSUN4Q96CB9 384 aaKnown RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 SRPK1Q96SB4 655 aaKnown RBP5.17□□□□□ -1.58
SPG11-211ENST00000558561 PTPN18Q99952 460 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 MRIQ9BWK5 157 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 EPN3Q9H201 632 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 BOLA2Q9H3K6 86 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 ZSWIM4Q9H7M6 989 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 PFDN2Q9UHV9 154 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 DENND2AQ9ULE3 1009 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 DDX19BQ9UMR2 479 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 CTNND2Q9UQB3 1225 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 MYO3BQ8WXR4 1341 aa5.17□□□□□ -1.58
SPG11-211ENST00000558561 ECM29Q5VYK3 1845 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 GPR75-ASB3A0A0A6YYF3 556 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 AURKAO14965 403 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 WDHD1O75717 1129 aaPredicted RBP5.16□□□□□ -1.58
SPG11-211ENST00000558561 TRHRP34981 398 aaPredicted RBP5.16□□□□□ -1.58
SPG11-211ENST00000558561 GDNFP39905 211 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 BTDP43251 543 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 RGS3P49796 1198 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 GRB10Q13322 594 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 BMS1Q14692 1282 aaKnown RBP5.16□□□□□ -1.58
SPG11-211ENST00000558561 SF1Q15637 639 aaKnown RBP5.16□□□□□ -1.58
SPG11-211ENST00000558561 MTERF2Q49AM1 385 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 TTC39AQ5SRH9 613 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 FYB2Q5VWT5 728 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 POMZP3Q6PJE2 187 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 SKAP1Q86WV1 359 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 SH3RF3Q8TEJ3 882 aaPredicted RBP5.16□□□□□ -1.58
SPG11-211ENST00000558561 TEKT1Q969V4 418 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 MKL1Q969V6 931 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 MAP6Q96JE9 813 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 HHIPL1Q96JK4 782 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 DNAJC7Q99615 494 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 DCTPP1Q9H773 170 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 GPR108Q9NPR9 543 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 ERVK13-1Q9NX77 482 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 RNF186Q9NXI6 227 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 AATFQ9NY61 560 aaKnown RBP eCLIP5.16□□□□□ -1.58
SPG11-211ENST00000558561 RAI14Q9P0K7 980 aa5.16□□□□□ -1.58
SPG11-211ENST00000558561 CDK5RAP2Q96SN8 1893 aa5.15□□□□□ -1.58
SPG11-211ENST00000558561 ARAP2Q8WZ64 1704 aa5.15□□□□□ -1.58
SPG11-211ENST00000558561 C2orf71A6NGG8 1288 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 NOTOA8MTQ0 251 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 PRKAB2O43741 272 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 PEX10O60683 326 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 IGSF3O75054 1194 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 CAPNS1P04632 268 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 PPP2R2AP63151 447 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 CYP4F3Q08477 520 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 PICALMQ13492 652 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 MIGA1Q8NAN2 632 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 TBC1D22AQ8WUA7 517 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 TGFBRAP1Q8WUH2 860 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 NKX2-4Q9H2Z4 354 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 PIF1Q9H611 641 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 SP110Q9HB58 689 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 GPRC5CQ9NQ84 441 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 GNL3LQ9NVN8 582 aaKnown RBP5.15□□□□□ -1.59
SPG11-211ENST00000558561 HDAC5Q9UQL6 1122 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 SALL1Q9NSC2 1324 aa5.15□□□□□ -1.59
SPG11-211ENST00000558561 CYP2D7A0A087X1C5 515 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 FADS2P1A8MWK0 482 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 AGRPO00253 132 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 GOLIM4O00461 696 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 FGF10O15520 208 aaPredicted RBP5.14□□□□□ -1.59
SPG11-211ENST00000558561 IDH1O75874 414 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms