RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 BECN2A8MW95 431 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 KBTBD13C9JR72 458 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 GCNT3O95395 438 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 GLRA2P23416 452 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 SNRPFP62306 86 aaKnown RBP16.4■□□□□ 0.22
VPS18-202ENST00000558474 TPM4P67936 248 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 KNOP1Q1ED39 458 aaKnown RBP16.4■□□□□ 0.22
VPS18-202ENST00000558474 HAUS6Q7Z4H7 955 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 NME8Q8N427 588 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 SCFD1Q8WVM8 642 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 LMBR1Q8WVP7 490 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 TRAPPC12Q8WVT3 735 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 NELFBQ8WX92 580 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 P2RX5Q93086 422 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 HPS3Q969F9 1004 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 TMEM143Q96AN5 459 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 RNF208Q9H0X6 261 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 C2orf40Q9H1Z8 148 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 TMEM134Q9H6X4 195 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 SUGCTQ9HAC7 445 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 SETD4Q9NVD3 440 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 SUCLA2Q9P2R7 463 aaPredicted RBP16.4■□□□□ 0.22
VPS18-202ENST00000558474 GTF2IRD1Q9UHL9 959 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 PHF24Q9UPV7 400 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 EVPLQ92817 2033 aa16.4■□□□□ 0.22
VPS18-202ENST00000558474 CCDC169A6NNP5 214 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 K7ENM7 598 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 PDXKO00764 312 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 NMT1P30419 496 aaKnown RBP16.39■□□□□ 0.21
VPS18-202ENST00000558474 EFNA5P52803 228 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 IGBP1P78318 339 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 MKRN4PQ13434 485 aaPredicted RBP16.39■□□□□ 0.21
VPS18-202ENST00000558474 NFIL3Q16649 462 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 NBPF20Q3BBV1 942 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 L1TD1Q5T7N2 865 aaKnown RBP16.39■□□□□ 0.21
VPS18-202ENST00000558474 SPATA1Q5VX52 437 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 TAF2Q6P1X5 1199 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 DHX40Q8IX18 779 aaKnown RBP16.39■□□□□ 0.21
VPS18-202ENST00000558474 METTL13Q8N6R0 699 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 TMEM161BQ8NDZ6 487 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 GOLGA5Q8TBA6 731 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 TMEM174Q8WUU8 243 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 PRPF31Q8WWY3 499 aaKnown RBP16.39■□□□□ 0.21
VPS18-202ENST00000558474 MAP7D2Q96T17 732 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 TSG101Q99816 390 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 RBSNQ9H1K0 784 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 TBC1D7Q9P0N9 293 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 ARHGAP28Q9P2N2 729 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 HDAC6Q9UBN7 1215 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 EXOC7Q9UPT5 735 aa16.39■□□□□ 0.21
VPS18-202ENST00000558474 GOLGA6L19H0YKK7 550 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
VPS18-202ENST00000558474 GJB1P08034 283 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 MYBP10242 640 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 SOX10P56693 466 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 LAMTOR4Q0VGL1 99 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 MTFR1Q15390 333 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 EDRF1Q3B7T1 1238 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 CDCA2Q69YH5 1023 aaPredicted RBP16.38■□□□□ 0.21
VPS18-202ENST00000558474 RPAINQ86UA6 219 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 ZNF410Q86VK4 478 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 IFNLR1Q8IU57 520 aaPredicted RBP16.38■□□□□ 0.21
VPS18-202ENST00000558474 ZBTB8OSQ8IWT0 167 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 LRRC71Q8N4P6 559 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 DEPTORQ8TB45 409 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 ASAP3Q8TDY4 903 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
VPS18-202ENST00000558474 BSNDQ8WZ55 320 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 DEFB118Q96PH6 123 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 ACCSQ96QU6 501 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 CRISPLD2Q9H0B8 497 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 KCTD10Q9H3F6 313 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 POLD4Q9HCU8 107 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 CTNND2Q9UQB3 1225 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 MAPK8IP1Q9UQF2 711 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 TRAF3IP3Q9Y228 551 aa16.38■□□□□ 0.21
VPS18-202ENST00000558474 SLC16A4O15374 487 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 CALUO43852 315 aaPredicted RBP16.37■□□□□ 0.21
VPS18-202ENST00000558474 SGPL1O95470 568 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 CYP2C9P11712 490 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 MRE11P49959 708 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 CLCN3P51790 818 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 CASP5P51878 434 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 ITGA7Q13683 1181 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 CAPSQ13938 189 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 NCAPHQ15003 741 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 PCBP1Q15365 356 aaKnown RBP eCLIP16.37■□□□□ 0.21
VPS18-202ENST00000558474 KLHL10Q6JEL2 608 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 TTI2Q6NXR4 508 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 MAP4K3Q8IVH8 894 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 KIAA0319LQ8IZA0 1049 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 AOPEPQ8N6M6 819 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 ANKLE1Q8NAG6 615 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 SLC43A3Q8NBI5 491 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 FGFBP2Q9BYJ0 223 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 TYW1Q9NV66 732 aaKnown RBP16.37■□□□□ 0.21
VPS18-202ENST00000558474 TBX20Q9UMR3 447 aa16.37■□□□□ 0.21
VPS18-202ENST00000558474 CEP350Q5VT06 3117 aa16.36■□□□□ 0.21
VPS18-202ENST00000558474 A0A0U1RQG5 324 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms