RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 AKAP3O75969 853 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 PRPF6O94906 941 aaKnown RBP9.07□□□□□ -0.96
SPG11-209ENST00000558253 MOCS3O95396 460 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 BAG6P46379 1132 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 QARSP47897 775 aaKnown RBP9.07□□□□□ -0.96
SPG11-209ENST00000558253 JAM2P57087 298 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 SNAP25P60880 206 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 KRT76Q01546 638 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 CYP4A11Q02928 519 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 CTTNQ14247 550 aaKnown RBP9.07□□□□□ -0.96
SPG11-209ENST00000558253 SHROOM1Q2M3G4 852 aaPredicted RBP9.07□□□□□ -0.96
SPG11-209ENST00000558253 TKFCQ3LXA3 575 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 ODR4Q5SWX8 454 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 DPY19L2P1Q6NXN4 242 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 CCDC174Q6PII3 467 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 INTS8Q75QN2 995 aaKnown RBP9.07□□□□□ -0.96
SPG11-209ENST00000558253 MIER3Q7Z3K6 550 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 USP37Q86T82 979 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 IFT20Q8IY31 132 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 CYP2W1Q8TAV3 490 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 COG1Q8WTW3 980 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 JDP2Q8WYK2 163 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 FAM81BQ96LP2 452 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 DRC1Q96MC2 740 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 ACCSQ96QU6 501 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 SENP7Q9BQF6 1050 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.07□□□□□ -0.96
SPG11-209ENST00000558253 AS3MTQ9HBK9 375 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 VEZTQ9HBM0 779 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 SLC38A10Q9HBR0 1119 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 MYOZ2Q9NPC6 264 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 RGL1Q9NZL6 768 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 HDAC6Q9UBN7 1215 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 CAPN6Q9Y6Q1 641 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 DUSP10Q9Y6W6 482 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 ATAD5Q96QE3 1844 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 PHF20L1A8MW92 1017 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 OPA1O60313 960 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 H2AFZP0C0S5 128 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 PLS3P13797 630 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 KCNA3P22001 575 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 SOX5P35711 763 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 FMO5P49326 533 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 CASP5P51878 434 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 EPHB4P54760 987 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 TNNC1P63316 161 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 CXCL9Q07325 125 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 RAD51AP2Q09MP3 1159 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 TCEAL1Q15170 157 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 RPS6KA1Q15418 735 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 DCAF17Q5H9S7 520 aaPredicted RBP9.06□□□□□ -0.96
SPG11-209ENST00000558253 KIAA1755Q5JYT7 1200 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 SWT1Q5T5J6 900 aaKnown RBP9.06□□□□□ -0.96
SPG11-209ENST00000558253 ALKBH5Q6P6C2 394 aaKnown RBP9.06□□□□□ -0.96
SPG11-209ENST00000558253 H2AFVQ71UI9 128 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 C4orf19Q8IY42 314 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 SYCP3Q8IZU3 236 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 FAM133AQ8N9E0 248 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 ACTRT1Q8TDG2 376 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 CLEC4DQ8WXI8 215 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 CAVIN3Q969G5 261 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 CDHR1Q96JP9 859 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 CAPZA3Q96KX2 299 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 CRACR2AQ9BSW2 395 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 TLR10Q9BXR5 811 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 FGFBP2Q9BYJ0 223 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 EPC1Q9H2F5 836 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 UNC45AQ9H3U1 944 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 MLXIPQ9HAP2 919 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 AGO4Q9HCK5 861 aaKnown RBP9.06□□□□□ -0.96
SPG11-209ENST00000558253 PRDM10Q9NQV6 1147 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 ZNF277Q9NRM2 450 aaPredicted RBP9.06□□□□□ -0.96
SPG11-209ENST00000558253 AGPAT3Q9NRZ7 376 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 GCNT4Q9P109 453 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 ADAMTS1Q9UHI8 967 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 TSR3Q9UJK0 312 aaKnown RBP9.06□□□□□ -0.96
SPG11-209ENST00000558253 NAGPAQ9UK23 515 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 NENFQ9UMX5 172 aa9.06□□□□□ -0.96
SPG11-209ENST00000558253 ZNF536O15090 1300 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 A0A087X0T9 212 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 C19orf81C9J6K1 198 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 CCDC188H7C350 402 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 WNT10BO00744 389 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 SRGAP2O75044 1071 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 PALMO75781 387 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 FAM228BP0C875 321 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 SLURP2P0DP57 97 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 ARP10275 920 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 DPEP1P16444 411 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 ITGB5P18084 799 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 SLC9A1P19634 815 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 GTF2H1P32780 548 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 SMTNP53814 917 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 RTP1P59025 263 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 PSMC5P62195 406 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 PTK2Q05397 1052 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 MTMR1Q13613 665 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 EZH2Q15910 746 aaKnown RBP9.05□□□□□ -0.96
SPG11-209ENST00000558253 DALRD3Q5D0E6 543 aaKnown RBP9.05□□□□□ -0.96
SPG11-209ENST00000558253 TCERG1LQ5VWI1 586 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms