RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 KCNJ14Q9UNX9 436 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 PPME1Q9Y570 386 aa15.27■□□□□ 0.04
SNRPA1-204ENST00000558020 WDR81Q562E7 1941 aa15.27■□□□□ 0.03
SNRPA1-204ENST00000558020 STK36Q9NRP7 1315 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 IGKV6-21A0A0C4DH24 114 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 PER2O15055 1255 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 TBX3O15119 743 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 CCNT1O60563 726 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 PFKFB2O60825 505 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 P4HBP07237 508 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 PPP2R5CQ13362 524 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 DUSP6Q16828 381 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 TWF2Q6IBS0 349 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 OTUD6AQ7L8S5 288 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 TMC7Q7Z402 723 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 RHPN2Q8IUC4 686 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 AIFM3Q96NN9 605 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 TCF25Q9BQ70 676 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 TRAIPQ9BWF2 469 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 BRMS1Q9HCU9 246 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 KIAA1671Q9BY89 1806 aa15.26■□□□□ 0.03
SNRPA1-204ENST00000558020 A0A087WZ62 844 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 STBD1O95210 358 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 SCRN1Q12765 414 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 NPY5RQ15761 445 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 HERC4Q5GLZ8 1057 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 TMEM184AQ6ZMB5 413 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 LRRC55Q6ZSA7 311 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 ANO5Q75V66 913 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 RNF135Q8IUD6 432 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 SLFN12Q8IYM2 578 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 TMEM87AQ8NBN3 555 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 FDXACB1Q9BRP7 624 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 CYP26B1Q9NR63 512 aa15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 BARX2Q9UMQ3 279 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-204ENST00000558020 C5orf42Q9H799 3197 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 FSCN2O14926 492 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 SLC37A4O43826 429 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 CSDE1O75534 798 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 HOXB8P17481 243 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 FGFR4P22455 802 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 RFC5P40937 340 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 PHKA2P46019 1235 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 RAB27AP51159 221 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 POLGP54098 1239 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 DRP2Q13474 957 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 PLPP4Q5VZY2 271 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 GLB1LQ6UWU2 654 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 CATSPER4Q7RTX7 472 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 ZNF598Q86UK7 904 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 HELQQ8TDG4 1101 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 PGBD4Q96DM1 585 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 CEP170P1Q96L14 293 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 MFSD14AQ96MC6 490 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 NLRP4Q96MN2 994 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 CEP89Q96ST8 783 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 SH2D3AQ9BRG2 576 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 PHF7Q9BWX1 381 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 KCNMB3Q9NPA1 279 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 TPCN1Q9ULQ1 816 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 PIN4Q9Y237 131 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 USP15Q9Y4E8 981 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 PCDHGC5Q9Y5F6 944 aa15.24■□□□□ 0.03
SNRPA1-204ENST00000558020 ATG2AQ2TAZ0 1938 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 PLXNA4Q9HCM2 1894 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 TMEM150BA6NC51 233 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 ASAP2O43150 1006 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 GAS2O43903 313 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 GLP2RO95838 553 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 ATF7P17544 494 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 RNASELQ05823 741 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 NCBP1Q09161 790 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 SMC1AQ14683 1233 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 EPHA7Q15375 998 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 CLLU1OSQ5K130 101 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 MRPL43Q8N983 215 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 TCP11Q8WWU5 503 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 PSPC1Q8WXF1 523 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 EDAQ92838 391 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 TMEM169Q96HH4 297 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 ZSWIM4Q9H7M6 989 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 RNF19AQ9NV58 838 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 HCSTQ9UBK5 93 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 VAV3Q9UKW4 847 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 COL4A3BPQ9Y5P4 624 aa15.23■□□□□ 0.03
SNRPA1-204ENST00000558020 LOC730098B7Z3J9 87 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 EML1O00423 815 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 ZNF623O75123 536 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 KRT2P35908 639 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 TECP42680 631 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 BCAR1P56945 870 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 TRIM29Q14134 588 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 GIT2Q14161 759 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 TPRNQ4KMQ1 711 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 PLA2G4FQ68DD2 849 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 C4orf19Q8IY42 314 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 SLC39A11Q8N1S5 342 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms