RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 POLR3FQ9H1D9 316 aaPredicted RBP18.57■□□□□ 0.56
PBX4-202ENST00000557978 STK17AQ9UEE5 414 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 ST3GAL5Q9UNP4 418 aa18.57■□□□□ 0.56
PBX4-202ENST00000557978 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
PBX4-202ENST00000557978 SFPQP23246 707 aaKnown RBP eCLIP18.56■□□□□ 0.56
PBX4-202ENST00000557978 PHKA2P46019 1235 aa18.56■□□□□ 0.56
PBX4-202ENST00000557978 WDR5P61964 334 aaKnown RBP18.56■□□□□ 0.56
PBX4-202ENST00000557978 PPP2R5AQ15172 486 aa18.56■□□□□ 0.56
PBX4-202ENST00000557978 C1orf186Q6ZWK4 172 aa18.56■□□□□ 0.56
PBX4-202ENST00000557978 FAM228AQ86W67 206 aa18.56■□□□□ 0.56
PBX4-202ENST00000557978 LEO1Q8WVC0 666 aaPredicted RBP18.56■□□□□ 0.56
PBX4-202ENST00000557978 LARP4BQ92615 738 aaKnown RBP18.56■□□□□ 0.56
PBX4-202ENST00000557978 RAD54LQ92698 747 aa18.56■□□□□ 0.56
PBX4-202ENST00000557978 IFT122Q9HBG6 1241 aa18.56■□□□□ 0.56
PBX4-202ENST00000557978 ERVK-5Q9HDB9 667 aa18.56■□□□□ 0.56
PBX4-202ENST00000557978 AMHP03971 560 aa18.55■□□□□ 0.56
PBX4-202ENST00000557978 SLC12A3P55017 1021 aa18.55■□□□□ 0.56
PBX4-202ENST00000557978 PCBP1Q15365 356 aaKnown RBP eCLIP18.55■□□□□ 0.56
PBX4-202ENST00000557978 TCTN1Q2MV58 587 aa18.55■□□□□ 0.56
PBX4-202ENST00000557978 AXDND1Q5T1B0 1012 aaPredicted RBP18.55■□□□□ 0.56
PBX4-202ENST00000557978 IFT74Q96LB3 600 aa18.55■□□□□ 0.56
PBX4-202ENST00000557978 DRC1Q96MC2 740 aa18.55■□□□□ 0.56
PBX4-202ENST00000557978 BLOC1S4Q9NUP1 217 aa18.55■□□□□ 0.56
PBX4-202ENST00000557978 FAM13BQ9NYF5 915 aa18.55■□□□□ 0.56
PBX4-202ENST00000557978 KCNG1Q9UIX4 513 aa18.55■□□□□ 0.56
PBX4-202ENST00000557978 ATP2A2P16615 1042 aaKnown RBP18.54■□□□□ 0.56
PBX4-202ENST00000557978 ZSCAN20P17040 1043 aaPredicted RBP18.54■□□□□ 0.56
PBX4-202ENST00000557978 GLRA2P23416 452 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 GUCY2CP25092 1073 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 STAT6P42226 847 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 CAPSQ13938 189 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 ADALQ6DHV7 355 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 IFNLR1Q8IU57 520 aaPredicted RBP18.54■□□□□ 0.56
PBX4-202ENST00000557978 ASAP3Q8TDY4 903 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 NFKBIZQ9BYH8 718 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 C17orf75Q9HAS0 396 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 GPRC5CQ9NQ84 441 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 RNF216Q9NWF9 866 aaPredicted RBP18.54■□□□□ 0.56
PBX4-202ENST00000557978 CHMP5Q9NZZ3 219 aa18.54■□□□□ 0.56
PBX4-202ENST00000557978 FNDC1Q4ZHG4 1894 aaPredicted RBP18.53■□□□□ 0.56
PBX4-202ENST00000557978 DENND3A2RUS2 1198 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 ENPP3O14638 875 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 NAMPTP43490 491 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 PTENP60484 403 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 SMAD3P84022 425 aaKnown RBP18.53■□□□□ 0.56
PBX4-202ENST00000557978 DHX8Q14562 1220 aaKnown RBP18.53■□□□□ 0.56
PBX4-202ENST00000557978 MCM6Q14566 821 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 SHC4Q6S5L8 630 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 MYOCDQ8IZQ8 938 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 RUSC1Q9BVN2 902 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 PANK2Q9BZ23 570 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 CHST12Q9NRB3 414 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 NLRC5Q86WI3 1866 aa18.53■□□□□ 0.56
PBX4-202ENST00000557978 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.52■□□□□ 0.56
PBX4-202ENST00000557978 LRRIQ4A6NIV6 560 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 HIP1RO75146 1068 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
PBX4-202ENST00000557978 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.52■□□□□ 0.56
PBX4-202ENST00000557978 SV2BQ7L1I2 683 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 CATSPER4Q7RTX7 472 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 GPBP1Q86WP2 473 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 ZBTB8OSQ8IWT0 167 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 PDILTQ8N807 584 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 PYM1Q9BRP8 204 aaKnown RBP18.52■□□□□ 0.56
PBX4-202ENST00000557978 C2orf40Q9H1Z8 148 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 TSPYL2Q9H2G4 693 aaPredicted RBP18.52■□□□□ 0.56
PBX4-202ENST00000557978 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 C1orf112Q9NSG2 853 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 DACT1Q9NYF0 836 aa18.52■□□□□ 0.56
PBX4-202ENST00000557978 CSDE1O75534 798 aaKnown RBP18.51■□□□□ 0.55
PBX4-202ENST00000557978 KRT18P05783 430 aaKnown RBP18.51■□□□□ 0.55
PBX4-202ENST00000557978 DEFB103AP81534 67 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 RESP18Q5W5W9 173 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 IQUBQ8NA54 791 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 LRRC15Q8TF66 581 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 TOP1MTQ969P6 601 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 ZBED2Q9BTP6 218 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 TMX1Q9H3N1 280 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 CUEDC2Q9H467 287 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 RGS18Q9NS28 235 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 ODF2LQ9ULJ1 636 aa18.51■□□□□ 0.55
PBX4-202ENST00000557978 INO80B-WBP1J3KQ70 363 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 ERLIN2O94905 339 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 FGFR4P22455 802 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 DMP1Q13316 513 aaPredicted RBP18.5■□□□□ 0.55
PBX4-202ENST00000557978 RAB30Q15771 203 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 NAALADL2Q58DX5 795 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 ARSHQ5FYA8 562 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 RTN4RL1Q86UN2 441 aaPredicted RBP18.5■□□□□ 0.55
PBX4-202ENST00000557978 HERC6Q8IVU3 1022 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 DEPTORQ8TB45 409 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 IPO9Q96P70 1041 aaKnown RBP18.5■□□□□ 0.55
PBX4-202ENST00000557978 ADAM2Q99965 735 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 LRRC27Q9C0I9 530 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 MINDY3Q9H8M7 445 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 POLD4Q9HCU8 107 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 LARSQ9P2J5 1176 aaKnown RBP18.5■□□□□ 0.55
PBX4-202ENST00000557978 MSRAQ9UJ68 235 aa18.5■□□□□ 0.55
PBX4-202ENST00000557978 A0A087X0B3 334 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms