RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 TGFBRAP1Q8WUH2 860 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 LMBR1Q8WVP7 490 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 RUNDC1Q96C34 613 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 TEKT5Q96M29 485 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 HEXIM2Q96MH2 286 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 PTCHD1Q96NR3 888 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 ELAC2Q9BQ52 826 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 FOXP3Q9BZS1 431 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 DUSP15Q9H1R2 295 aaPredicted RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 PCIF1Q9H4Z3 704 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 SMURF1Q9HCE7 757 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 PUF60Q9UHX1 559 aaKnown RBP6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 TCFL5Q9UL49 500 aa6.09□□□□□ -1.43
MTHFD1-216ENST00000557539 GNAT3A8MTJ3 354 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 FAM155AB1AL88 458 aaPredicted RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 ZNF561-AS1K7EIQ3 104 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 PMM2O15305 246 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 FGF10O15520 208 aaPredicted RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 CTNND1O60716 968 aaKnown RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 ZRANB2O95218 330 aaKnown RBP eCLIP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 ZNF865P0CJ78 1059 aaPredicted RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 ZBTB48P10074 688 aaPredicted RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 MYBP10242 640 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 SRFP11831 508 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 ADMP35318 185 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 PHC1P78364 1004 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 ACAP1Q15027 740 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 CIAPIN1Q6FI81 312 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 TTLL7Q6ZT98 887 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 C22orf34Q6ZV56 151 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 PTRH1Q86Y79 214 aaKnown RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 FBXL6Q8N531 539 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 NAT16Q8N8M0 369 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 ZNF610Q8N9Z0 462 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 LINC00116Q8NCU8 138 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 PARD3BQ8TEW8 1205 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 ZDHHC5Q9C0B5 715 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 CDIP1Q9H305 208 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 TRIT1Q9H3H1 467 aaKnown RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 SP110Q9HB58 689 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 C1orf112Q9NSG2 853 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 CCM2LQ9NUG4 571 aaPredicted RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 CFDP1Q9UEE9 299 aaPredicted RBP6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 NRXN1Q9ULB1 1477 aa6.08□□□□□ -1.44
MTHFD1-216ENST00000557539 C7orf72A4D263 438 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 WASH4PA8MWX3 477 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 DVL2O14641 736 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 NRDCO43847 1150 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 KDM1AO60341 852 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 OFD1O75665 1012 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 WDHD1O75717 1129 aaPredicted RBP6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 TBC1D8O95759 1140 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 AMY2AP04746 511 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 GNAT1P11488 350 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 COL6A2P12110 1019 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 AMY2BP19961 511 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 SERPINB3P29508 390 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 HTR3AP46098 478 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 GTF2A2P52657 109 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 KIF11P52732 1056 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 ADCY1Q08828 1119 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 ZNF267Q14586 743 aaPredicted RBP6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 PDCD1Q15116 288 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 GPR19Q15760 415 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 ANGEL2Q5VTE6 544 aaKnown RBP6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 CDKAL1Q5VV42 579 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 FSTL4Q6MZW2 842 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 B3GNT9Q6UX72 402 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 ARHGAP36Q6ZRI8 547 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 VPS37AQ8NEZ2 397 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 SLC35G2Q8TBE7 412 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 JADE3Q92613 823 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 GATA6Q92908 595 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 TAAR9Q96RI9 348 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 PIM2Q9P1W9 311 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 PCDHA11Q9Y5I1 949 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 FASNP49327 2511 aaKnown RBP6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 ERBINQ96RT1 1412 aa6.07□□□□□ -1.44
MTHFD1-216ENST00000557539 METP08581 1390 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 PARP4Q9UKK3 1724 aaKnown RBP6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 WTIPA6NIX2 430 aaPredicted RBP6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 IGF2BP3O00425 579 aaKnown RBP eCLIP6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 NPHS1O60500 1241 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 HIP1RO75146 1068 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 MYL3P08590 195 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 TAL1P17542 331 aaPredicted RBP6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 PKN2Q16513 984 aaKnown RBP6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 MSMPQ1L6U9 139 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 INO80DQ53TQ3 878 aaPredicted RBP6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 FAM83BQ5T0W9 1011 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 NFXL1Q6ZNB6 911 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 EP400NLQ6ZTU2 488 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 FRMD7Q6ZUT3 714 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 CEP68Q76N32 757 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 TSPYL5Q86VY4 417 aaPredicted RBP6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 LDHDQ86WU2 507 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 PPM1EQ8WY54 764 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 TMEM169Q96HH4 297 aa6.06□□□□□ -1.44
MTHFD1-216ENST00000557539 DDX21Q9NR30 783 aaKnown RBP eCLIP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms